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BaseInfo

ncRNA ID gma-miR1523b
Species Glycine max
Class miRNA
Genome position chr2:12253298-12253448 [+]
Reference genome v1.0
Source miRBase
Length 20
Mature sequence(if miRNA) 61 - UCAUCGCUCCUGAGCUCACA - 80
Stem-loop(if miRNA) UA      UUUUGAAAUAAAUGUGAGCUCGGGAGUAAUGAGGAGUGAUGAAAGGAUUUAUUCAUCGCUCCUGAG
  GACUCA                                                                  C
  ||||||                                                                  U
  CGAAUA                                                                  C
UG      AAUGUACUUCGAACAGGGAGAUGACCACUUAGUUAAUCCCAGUUCCUGGGUAAUACCCUAUUUACA
Stem-loop sequence UAGACUCAUUUUGAAAUAAAUGUGAGCUCGGGAGUAAUGAGGAGUGAUGAAAGGAUUUAUUCAUCGCUCCUGAGCUCACAUUUAUCCCAUAAUGGGUCCUUGACCCUAAUUGAUUCACCAGUAGAGGGACAAGCUUCAUGUAAAUAAGCGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ242658.1
ncRNA:20   ACACUCGAGUCCUCGCUACU   1
  ||||||||||||||||||||
targets:22   UGUGAGCUCAGGAGCGAUGA   41

0.0 Sequence 8653 from Patent EP2985353 NA coding protein psRNATarget
JB170989.1
ncRNA:20   ACACUCGAGUCCUCGCUACU   1
  ||||||||||||||||||||
targets:22   UGUGAGCUCAGGAGCGAUGA   41

0.0 Sequence 8653 from Patent EP2559767 NA coding protein psRNATarget
HI410528.1
ncRNA:20   ACACUCGAGUCCUCGCUACU   1
  ||||||||||||||||||||
targets:22   UGUGAGCUCAGGAGCGAUGA   41

0.0 Sequence 8653 from Patent EP2074227 NA coding protein psRNATarget

Reference

1 PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome";
Radwan O, Liu Y, Clough SJ;
Mol Plant Microbe Interact. 24:958-972(2011).