ncRNA ID | gma-miR1523b |
Species | Glycine max |
Class | miRNA |
Genome position | chr2:12253298-12253448 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 20 |
Mature sequence(if miRNA) | 61 - UCAUCGCUCCUGAGCUCACA - 80 |
Stem-loop(if miRNA) |
UA      UUUUGAAAUAAAUGUGAGCUCGGGAGUAAUGAGGAGUGAUGAAAGGAUUUAUUCAUCGCUCCUGAG   GACUCA                                                                  C   ||||||                                                                  U   CGAAUA                                                                  C UG      AAUGUACUUCGAACAGGGAGAUGACCACUUAGUUAAUCCCAGUUCCUGGGUAAUACCCUAUUUACA |
Stem-loop sequence | UAGACUCAUUUUGAAAUAAAUGUGAGCUCGGGAGUAAUGAGGAGUGAUGAAAGGAUUUAUUCAUCGCUCCUGAGCUCACAUUUAUCCCAUAAUGGGUCCUUGACCCUAAUUGAUUCACCAGUAGAGGGACAAGCUUCAUGUAAAUAAGCGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LQ242658.1 |
|
0.0 | Sequence 8653 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
JB170989.1 |
|
0.0 | Sequence 8653 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
HI410528.1 |
|
0.0 | Sequence 8653 from Patent EP2074227 | NA | coding protein | psRNATarget |
1 | PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome"; Radwan O, Liu Y, Clough SJ; Mol Plant Microbe Interact. 24:958-972(2011). |