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BaseInfo

ncRNA ID gma-miR398b
Species Glycine max
Class miRNA
Genome position chr2:10988433-10988567 [-]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 20 - UGUGUUCUCAGGUCACCCCUU - 40
Stem-loop(if miRNA) -A   CAAAU    UAU        A   G                CU    UG A  GC       UGA
  GUC     GGUU   CUCAGAGG GUG AUCUGAGAACACAAGG  GGUU  C CU  UAUAUUA   U
  |||     ||||   |||||||| ||| ||||||||||||||||  ||||  | ||  |||||||
  CAG     CCAA   GAGUUUCC CAC UGGACUCUUGUGUUUC  UUAA  G GA  AUAUGGU   C
UA   -UUGU    -CC        C   -                AU    GU -  --       UAG
Stem-loop sequence AGUCCAAAUGGUUUAUCUCAGAGGAGUGGAUCUGAGAACACAAGGCUGGUUUGCACUGCUAUAUUAUGAUCGAUUGGUAUAAGGUGAAUUUACUUUGUGUUCUCAGGUCACCCCUUUGAGCCAACCUGUUGACAU

Reference

1 PMID:21571671
"Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis";
Devers EA, Branscheid A, May P, Krajinski F;
Plant Physiol. 156:1990-2010(2011).