Search result

BaseInfo

ncRNA ID gma-miR4348c
Species Glycine max
Class miRNA
Genome position chr2:10789497-10789619 [+]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 6 - UGUUAAACUUGCAAGAUGACA - 26
Stem-loop(if miRNA) -A                       CAU         A    ----UAGAA    UUAGAAUA
  UAUGUGUUAAACUUGCAAGAUGA   UAUUAUGAU GUUG         ACAU        G
  |||||||||||||||||||||||   ||||||||| ||||         ||||        C
  AUACACAAUUUGAAUGUUCUACU   AUAAUGCUA CAAC         UGUA        A
UA                       AUU         -    UUAUGAGAG    UGACCAGA
Stem-loop sequence AUAUGUGUUAAACUUGCAAGAUGACAUUAUUAUGAUAGUUGUAGAAACAUUUAGAAUAGCAAGACCAGUAUGUGAGAGUAUUCAACAUCGUAAUAUUAUCAUCUUGUAAGUUUAACACAUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT093225.1
ncRNA:21   ACAGUAGAACGUUCAAAUUGU   1
  |*||*||||*|||||||||||
targets:764   UCUCUUCUUCCAAGUUUAACA   784

2.5 Soybean clone JCVI-FLGm-17C9 unknown mRNA NA coding protein psRNATarget

Reference

1 PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons";
Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ;
PLoS One. 9:e86153(2014).