ncRNA ID | gma-miR4348c |
Species | Glycine max |
Class | miRNA |
Genome position | chr2:10789497-10789619 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 6 - UGUUAAACUUGCAAGAUGACA - 26 |
Stem-loop(if miRNA) |
-A                       CAU         A    ----UAGAA    UUAGAAUA   UAUGUGUUAAACUUGCAAGAUGA   UAUUAUGAU GUUG         ACAU        G   |||||||||||||||||||||||   ||||||||| ||||         ||||        C   AUACACAAUUUGAAUGUUCUACU   AUAAUGCUA CAAC         UGUA        A UA                       AUU         -    UUAUGAGAG    UGACCAGA |
Stem-loop sequence | AUAUGUGUUAAACUUGCAAGAUGACAUUAUUAUGAUAGUUGUAGAAACAUUUAGAAUAGCAAGACCAGUAUGUGAGAGUAUUCAACAUCGUAAUAUUAUCAUCUUGUAAGUUUAACACAUAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT093225.1 |
|
2.5 | Soybean clone JCVI-FLGm-17C9 unknown mRNA | NA | coding protein | psRNATarget |
1 | PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014). |