| ncRNA ID | gma-miR482a-3p |
| Species | Glycine max |
| Class | miRNA |
| Genome position | chr2:7783819-7783913 [+] |
| Reference genome | v1.0 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 62 - UCUUCCCAAUUCCGCCCAUUCCUA - 85 |
| Stem-loop(if miRNA) |
U UG -U C -GU UGG UCAGAA U UGGGAAUGGGC GAUUGGGAAG AAU GUGC U |||||| | ||||||||||| |||||||||| ||| |||| G AGUCUU A AUCCUUACCCG UUAACCCUUC UUA UACG C U GU CC U AUU UAA |
| Stem-loop sequence | UCAGAAUUUGUGGGAAUGGGCUGAUUGGGAAGCAAUGUGUGCUGGUGCAAUGCAUUUAAUUUCUUCCCAAUUCCGCCCAUUCCUAUGAUUUCUGA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_006588226.2 |
|
3.0 | PREDICTED: Glycine max probable serine/threonine-protein kinase At1g18390 (LOC102665385), mRNA | probable serine/threonine-protein kinase At1g18390(LOC102665385) | coding protein | psRNATarget |
| 1 | PMID:18402695
"Novel and nodulation-regulated microRNAs in soybean roots"; Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O; BMC Genomics. 9:160(2008). |
| 2 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |
| 3 | PMID:21504877
"MicroRNAs in the shoot apical meristem of soybean"; Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL; J Exp Bot. 62:2495-2506(2011). |
| 4 | PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs"; Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC; Genes Dev. 25:2540-2553(2011). |
| 5 | PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014). |