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BaseInfo

ncRNA ID	gma-miR164a
Species	Glycine max
Class	miRNA
Genome position	chr19:49560501-49560595 [+]
Reference genome	v1.0
Source	miRBase
Length	21
Mature sequence(if miRNA)	11 - UGGAGAAGCAGGGCACGUGCA - 31
Stem-loop(if miRNA)	-   U  U           CA             --UC  -U   AUCU  AGC CC UGUUGGAGAAG  GGGCACGUGCAAG    UC  UGG    C  ||| || |||||||||||  |||||||||||||    ||  |||  UUG GG ACAACCUCUUC  CUCGUGCACGUUU    AG  ACC    A U   -  C           CC             CCCA  UC   GUAA
Stem-loop sequence	AGCUCCUUGUUGGAGAAGCAGGGCACGUGCAAGUCUCUUGGAUCUCAAAUGCCACUGAACCCUUUGCACGUGCUCCCCUUCUCCAACACGGGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003524678.3	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   **=|||||||||||||||||| targets:896   CUUACGUGCCCUGCUUCUCCA   916 Target Full Sequence	1.0	PREDICTED: Glycine max NAC domain-containing protein 100-like (LOC100798002), mRNA	NAC domain-containing protein 100-like(LOC100798002)	coding protein	psRNATarget
XM_003549636.3	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   **=|||||||||||||||||| targets:811   CUUACGUGCCCUGCUUCUCCA   831 Target Full Sequence	1.0	PREDICTED: Glycine max NAC domain-containing protein 100 (LOC100170719), mRNA	NAC domain-containing protein 100(LOC100170719)	coding protein	psRNATarget
EU661925.1	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   **=|||||||||||||||||| targets:784   CUUACGUGCCCUGCUUCUCCA   804 Target Full Sequence	1.0	Glycine max NAC domain protein (NAC28) mRNA, partial cds	NA	coding protein	psRNATarget
BT094159.1	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   **=|||||||||||||||||| targets:734   CUUACGUGCCCUGCUUCUCCA   754 Target Full Sequence	1.0	Soybean clone JCVI-FLGm-18C12 unknown mRNA	NA	coding protein	psRNATarget
EU661927.1	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   *|||*|||||||||||||||| targets:649   AGCAAGUGCCCUGCUUCUCCA   669 Target Full Sequence	1.0	Glycine max NAC domain protein (NAC34) mRNA, complete cds	NA	coding protein	psRNATarget
EU440355.1	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   *|||*|||||||||||||||| targets:636   AGCAAGUGCCCUGCUUCUCCA   656 Target Full Sequence	1.0	Glycine max transcriptional factor NAC35 (NAC35) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001248972.1	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   *|||*|||||||||||||||| targets:636   AGCAAGUGCCCUGCUUCUCCA   656 Target Full Sequence	1.0	Glycine max transcriptional factor NAC35 (NAC35), mRNA	transcriptional factor NAC35(NAC35)	coding protein	psRNATarget
NM_001251326.2	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   *|||*|||||||||||||||| targets:647   AGCAAGUGCCCUGCUUCUCCA   667 Target Full Sequence	1.0	Glycine max NAC domain protein (NAC34), mRNA	NAC domain protein(NAC34)	coding protein	psRNATarget
KT031221.1	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   *|||*|||||||||||||||| targets:602   AGCAAGUGCCCUGCUUCUCCA   622 Target Full Sequence	1.0	Glycine max clone HN_CCL_172 NAC transcription factor (Glyma15g40510.1) mRNA, partial cds	NA	coding protein	psRNATarget
KT031214.1	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   *|||*|||||||||||||||| targets:602   AGCAAGUGCCCUGCUUCUCCA   622 Target Full Sequence	1.0	Glycine max clone HN_CCL_61 NAC transcription factor (Glyma08g18470.1) mRNA, partial cds	NA	coding protein	psRNATarget
JX392400.1	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   **=||||*||||||||||||| targets:755   CUUACGUACCCUGCUUCUCCA   775 Target Full Sequence	2.0	Glycine max NAC domain protein (NLP) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001289292.1	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   **=||||*||||||||||||| targets:755   CUUACGUACCCUGCUUCUCCA   775 Target Full Sequence	2.0	Glycine max NAC domain-containing protein 100-like (NLP), mRNA	NAC domain-containing protein 100-like(NLP)	coding protein	psRNATarget
NM_001248970.3	ncRNA:21   ACG--UGCACGGGACGAAGAGGU   1   |||--|||||||||||||||||| targets:772   UGCUUACGUGCCCUGCUUCUCCA   794 Target Full Sequence	2.5	Glycine max NAC domain protein NAC5 (NAC5), mRNA	no apical meristem-like protein(LOC547650)	coding protein	psRNATarget
AF532619.1	ncRNA:21   ACG--UGCACGGGACGAAGAGGU   1   |||--|||||||||||||||||| targets:775   UGCUUACGUGCCCUGCUUCUCCA   797 Target Full Sequence	2.5	Glycine max no apical meristem-like protein mRNA, complete cds	NA	coding protein	psRNATarget
DQ028773.1	ncRNA:21   ACG--UGCACGGGACGAAGAGGU   1   |||--|||||||||||||||||| targets:707   UGCUUACGUGCCCUGCUUCUCCA   729 Target Full Sequence	2.5	Glycine max NAC domain protein NAC5 (NAC5) mRNA, complete cds	NA	coding protein	psRNATarget

Reference

1	PMID:18402695 "Novel and nodulation-regulated microRNAs in soybean roots"; Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O; BMC Genomics. 9:160(2008).