ncRNA ID | gma-miR9745 |
Species | Glycine max |
Class | miRNA |
Genome position | chr19:49543831-49543980 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 8 - AGAAUUAAAUUUGGACCGUAUAAC - 31 |
Stem-loop(if miRNA) |
      G GA                               G             CG   AAAAGUCACAUGAC GAGUGA A  AUUAAAUUUGGACCGUAUAACCAAACAUGGA GGUUAAGAUUUAA  UUA              U |||||| |  ||||||||||||||||||||||||||||||| |||||||||||||  |||              U CUCAUU U  UAAUUUAGACCUGGCAUAUUGGUUUGUACUU CUAGUUCUAAAUU  CAG              U       G UC                               G             -A   UACAUUGGUGAAUU |
Stem-loop sequence | GAGUGAGAGAAUUAAAUUUGGACCGUAUAACCAAACAUGGAGGGUUAAGAUUUAACGUUAAAAAGUCACAUGACUUUUUAAGUGGUUACAUGACAUUAAAUCUUGAUCGUUCAUGUUUGGUUAUACGGUCCAGAUUUAAUCUUGUUACUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014778197.1 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100782481 (LOC100782481), transcript variant X3, mRNA | uncharacterized LOC100782481(LOC100782481) | coding protein | psRNATarget | |||||||||
XM_006583910.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100782481 (LOC100782481), transcript variant X1, mRNA | uncharacterized LOC100782481(LOC100782481) | coding protein | psRNATarget | |||||||||
XM_014778196.1 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100782481 (LOC100782481), transcript variant X2, mRNA | uncharacterized LOC100782481(LOC100782481) | coding protein | psRNATarget |
1 | PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014). |