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BaseInfo

ncRNA ID gma-miR1520r
Species Glycine max
Class miRNA
Genome position chr19:48884039-48884153 [-]
Reference genome v1.0
Source miRBase
Length 24
Mature sequence(if miRNA) 77 - UGUCACAUCCUGGUUGGACAUGAA - 100
Stem-loop(if miRNA)         U           CAUC           -    A   UGCGUCCAAGAAU
ACAUUGAC GUCACGUGUCA    CUGGUUGGACA UGAA AGA             C
|||||||| |||||||||||    ||||||||||| |||| |||
UGUAACUG CAGUGUACAGU    GACUAGCCUGU ACUU UCU             C
        C           ACAA           U    A   UUUUACAAUAUUA
Stem-loop sequence ACAUUGACUGUCACGUGUCACAUCCUGGUUGGACAUGAAAAGAUGCGUCCAAGAAUCCAUUAUAACAUUUUUCUAUUCAUUGUCCGAUCAGAACAUGACAUGUGACCGUCAAUGU

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).