ncRNA ID | gma-miR1520r |
Species | Glycine max |
Class | miRNA |
Genome position | chr19:48884039-48884153 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 77 - UGUCACAUCCUGGUUGGACAUGAA - 100 |
Stem-loop(if miRNA) |
        U           CAUC           -    A   UGCGUCCAAGAAU ACAUUGAC GUCACGUGUCA    CUGGUUGGACA UGAA AGA             C |||||||| |||||||||||    ||||||||||| |||| ||| UGUAACUG CAGUGUACAGU    GACUAGCCUGU ACUU UCU             C         C           ACAA           U    A   UUUUACAAUAUUA |
Stem-loop sequence | ACAUUGACUGUCACGUGUCACAUCCUGGUUGGACAUGAAAAGAUGCGUCCAAGAAUCCAUUAUAACAUUUUUCUAUUCAUUGUCCGAUCAGAACAUGACAUGUGACCGUCAAUGU |
1 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |