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BaseInfo

ncRNA ID	gma-miR1535b
Species	Glycine max
Class	miRNA
Genome position	chr19:43786762-43786851 [-]
Reference genome	v1.0
Source	miRBase
Length	21
Mature sequence(if miRNA)	60 - CUUGUUUGUGGUGAUGUCUAG - 80
Stem-loop(if miRNA)	UCUUUG    C     U    -   -UG      CC    AG    GA       GUGA UUGUU GUGG UGA   UCUAGG  UCUU  CCUU  G       |||| ||||| |||| |||   ||||||  ||||  ||||       UAUU AACGA CACC AUU   GGGUUC  AGGA  GGAA  A ----UG    A     -    U   CAA      -A    AA    AG
Stem-loop sequence	UCUUUGGUGACUUGUUUGUGGUGAUGUCUAGGCCUCUUAGCCUUGAGAGAAAGGAAAGGAACUUGGGAACUUAUCCACAGCAAAUUAUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003528622.3	ncRNA:21   GAUCUGUAGUGGUGUUUGUUC   1   |||*||||||||||||||||* targets:662   CUAAACAUCACCACAAACAAA   682 Target Full Sequence	2.0	PREDICTED: Glycine max adenylate isopentenyltransferase 5, chloroplastic-like (LOC100782474), mRNA	adenylate isopentenyltransferase 5, chloroplastic-like(LOC100782474)	coding protein	psRNATarget
XM_003550461.3	ncRNA:21   GAUCUGUAGUGGUGUUUGUUC   1   ||||||||||||||=|||||* targets:551   CUAGACAUCACCACGAACAAA   571 Target Full Sequence	2.5	PREDICTED: Glycine max adenylate isopentenyltransferase 5, chloroplastic (LOC100778430), mRNA	adenylate isopentenyltransferase 5, chloroplastic(LOC100778430)	coding protein	psRNATarget
XM_003551801.3	ncRNA:21   GAUCUGUAGUGGUGUUUGUUC   1   =|=|||||||=|||||||||| targets:264   UUGGACAUCAUCACAAACAAG   284 Target Full Sequence	2.5	PREDICTED: Glycine max adenylate isopentenyltransferase 5, chloroplastic-like (LOC100817288), mRNA	adenylate isopentenyltransferase 5, chloroplastic-like(LOC100817288)	coding protein	psRNATarget
XM_014772536.1	ncRNA:21   GAUCUGUAGUGGUGUUUGUUC   1   ||*|||||||||||*|||||| targets:648   CUCGACAUCACCACCAACAAG   668 Target Full Sequence	2.5	PREDICTED: Glycine max adenylate isopentenyltransferase-like (LOC100779563), mRNA	adenylate isopentenyltransferase-like(LOC100779563)	coding protein	psRNATarget
XM_003536632.3	ncRNA:21   GAUCUGUAGUGGUGUUUGUUC   1   ||*|||||||||||*|||||| targets:657   CUCGACAUCACCACCAACAAG   677 Target Full Sequence	2.5	PREDICTED: Glycine max adenylate isopentenyltransferase (LOC100813761), mRNA	adenylate isopentenyltransferase(LOC100813761)	coding protein	psRNATarget
XM_006578107.2	ncRNA:21   GAUCUGUAGUGGUGUUUGUUC   1   *|||=*|*||||||||||||| targets:149   AUAGGAAGCACCACAAACAAG   169 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC102661561 (LOC102661561), mRNA	uncharacterized LOC102661561(LOC102661561)	coding protein	psRNATarget

Reference

1	PMID:21504877 "MicroRNAs in the shoot apical meristem of soybean"; Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL; J Exp Bot. 62:2495-2506(2011).