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BaseInfo

ncRNA ID gma-miR4995
Species Glycine max
Class miRNA
Genome position chr19:38040436-38040525 [+]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 11 - AGGCAGUGGCUUGGUUAAGGG - 31
Stem-loop(if miRNA) -UAAAAC           G       U    GAA  ---C    GA
       UCAUAGGCAGU GCUUGGU AAGG   GC    ACUG  G
       ||||||||||| ||||||| ||||   ||    ||||
       GGUAUUUGUUA CGGGCCA UUCU   CG    UGAU  C
AAGCCCA           A       C    GAA  AAAA    GC
Stem-loop sequence UAAAACUCAUAGGCAGUGGCUUGGUUAAGGGAAGCCACUGGAGCCGUAGUAAAAGCAAGUCUUCACCGGGCAAUUGUUUAUGGACCCGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT099237.1
ncRNA:21   GGGAAUUGGUUCGGUGACGGA   1
  |||||||||||||||||||||
targets:593   CCCUUAACCAAGCCACUGCCU   613

0.0 Soybean clone JCVI-FLGm-16L6 unknown mRNA NA coding protein psRNATarget

Reference

1 PMID:21504877
"MicroRNAs in the shoot apical meristem of soybean";
Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL;
J Exp Bot. 62:2495-2506(2011).