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BaseInfo

ncRNA ID gma-miR5225
Species Glycine max
Class miRNA
Genome position chr19:1921602-1921714 [+]
Reference genome v1.0
Source miRBase
Length 22
Mature sequence(if miRNA) 11 - CCUGUCGUAGGAGAGAUGACGC - 32
Stem-loop(if miRNA) UUU    A  C U    U             C  U      ---G   AUUAAUAUG
   AGGG CU C GUCG AGGAGAGAUGACG CU CUGUUA    GUA         U
   |||| || | |||| ||||||||||||| || ||||||    |||         U
   UCCC GA G CGGC UCCUUUCUACUGU GA GACGAU    UUC         G
ACU    C  A U    -             C  U      UAAG   AACCGAAAC
Stem-loop sequence UUUAGGGACUCCUGUCGUAGGAGAGAUGACGCCUUCUGUUAGGUAAUUAAUAUGUUGCAAAGCCAACUUGAAUUAGCAGUAGCUGUCAUCUUUCCUCGGCUGAAGCCCCUUCA

Reference

1 PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs";
Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC;
Genes Dev. 25:2540-2553(2011).