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BaseInfo

ncRNA ID gma-miR5786
Species Glycine max
Class miRNA
Genome position chr19:1902504-1902643 [+]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 11 - UGUCGCAGGAUAGAGGGCACU - 31
Stem-loop(if miRNA) G                      A         G    --    - AUGAUGCAUGCAAAAAUAUAUUAUG
 AGAGAGUCUUGUCGCAGGAUAG GGGCACUGG UAUG  GCAU G                         U
 |||||||||||||||||||||| ||||||||| ||||  |||| |
 UCUCUUAGAACAGCGUUCUGUC CCUGUGAUC AUAU  AUAU U                         G
G                      -         G    AA    U AUGUACGAAUUAAUACUAAAGUCGU
Stem-loop sequence GAGAGAGUCUUGUCGCAGGAUAGAGGGCACUGGGUAUGGCAUGAUGAUGCAUGCAAAAAUAUAUUAUGUGUGCUGAAAUCAUAAUUAAGCAUGUAUUUAUAAAUAUAGCUAGUGUCCCUGUCUUGCGACAAGAUUCUCUG

Reference

1 PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs";
Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC;
Genes Dev. 25:2540-2553(2011).
2 PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons";
Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ;
PLoS One. 9:e86153(2014).