Search result

BaseInfo

ncRNA ID gma-miR5044
Species Glycine max
Class miRNA
Genome position chr18:61655919-61656069 [-]
Reference genome v1.0
Source miRBase
Length 22
Mature sequence(if miRNA) 69 - GUAGUGGAUGCCUAGAGGUCCA - 90
Stem-loop(if miRNA) -----------UA      UCAAAGGCUUCCACUACUGCAUGUUUCUGUGGUUUAAUAUCCUGAAACAAGUGGUAGUGGA
             GUGGCC                                                             U
             ||||||
             GAUGUU                                                             G
AGUGUCAUAAACC      UUAUAUAACAUCUUUAAAGUCUCCUAUUUUUGUACUCGUAACGAAAAUUACCUGGAGAUCC
Stem-loop sequence UAGUGGCCUCAAAGGCUUCCACUACUGCAUGUUUCUGUGGUUUAAUAUCCUGAAACAAGUGGUAGUGGAUGCCUAGAGGUCCAUUAAAAGCAAUGCUCAUGUUUUUAUCCUCUGAAAUUUCUACAAUAUAUUUUGUAGCCAAAUACUGUGA

Reference

1 PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome";
Radwan O, Liu Y, Clough SJ;
Mol Plant Microbe Interact. 24:958-972(2011).
2 PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses";
Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R;
BMC Genomics. 12:307(2011).
3 PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons";
Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ;
PLoS One. 9:e86153(2014).