ncRNA ID | gma-miR390e |
Species | Glycine max |
Class | miRNA |
Genome position | chr18:53278034-53278160 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 20 |
Mature sequence(if miRNA) | 14 - AGCUCAGGAGGGAUAGCGCC - 33 |
Stem-loop(if miRNA) |
G     U UG A          -   A      CAU        UU  --U     UU     UA  AAGAA U  U AAGCUCAGGA GGG UAGCGC   GGAAGGUC  UC   ACUAA  UGCUC  U  ||||| |  | |||||||||| ||| ||||||   ||||||||  ||   |||||  |||||  UUCUU G  A UUUGAGUCCU CCC AUCGCG   UCUUCUAG  AG   UGGUU  GUGGG  C -     U GU C          A   -      AUC        CU  CUU     UC     UA |
Stem-loop sequence | GAAGAAUUUGUAAAGCUCAGGAGGGAUAGCGCCAUGGAAGGUCUUUCUACUAAUUUGCUCUAUCAUGGGUGCUUUGGUUUCGAUCGAUCUUCUCUAGCGCUACCCAUCCUGAGUUUCAUGGUUUCUU |
1 | PMID:22559273
"Genome organization and characteristics of soybean microRNAs"; Turner M, Yu O, Subramanian S; BMC Genomics. 13:169(2012). |