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BaseInfo

ncRNA ID	gma-miR9756
Species	Glycine max
Class	miRNA
Genome position	chr18:47593856-47594092 [+]
Reference genome	v1.0
Source	miRBase
Length	22
Mature sequence(if miRNA)	211 - UGAGAACUUUAUCCAAACAGAG - 232
Stem-loop(if miRNA)	CUAUG  C                      A       A     A      UAACAAGUU       A        A   -  C        -------------UU    ----UU     AAAAAU      GC CUGUUUGGGUAAAGUUCUCAAU AGCACUU UAGGA AAGAAA         AAAAUGA UUAAGCUU UCC CA AAGUUAAA               AGCU      UGGAA      G      || |||||||||||||||||||||| ||||||| ||||| ||||||         ||||||| |||||||| ||| || ||||||||               ||||      |||||      CG GACAAACCUAUUUCAAGAGUUA UCGUGAA AUUUU UUCUUU         UUUUACU AAUUUGAA GGG GU UUCAAUUU               UCGA      ACCUU      A -AUAA  A                      C       C     C      -UAUCUAUC       A        -   A  A        UAAUCAAAUACAUAU    UUAAAU     CAAAAA
Stem-loop sequence	CUAUGGCCCUGUUUGGGUAAAGUUCUCAAUAAGCACUUAUAGGAAAAGAAAUAACAAGUUAAAAUGAAUUAAGCUUAUCCCACAAGUUAAAUUAGCUUUUGGAAAAAAAUGAAAAAACUUCCAUAAAUUAGCUUAUACAUAAACUAAUUUUAACUUAUGAGGGAAGUUUAAAUCAUUUUCUAUCUAUUUUCUUCUUUUACAAGUGCUCAUUGAGAACUUUAUCCAAACAGAGCAAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014762009.1	ncRNA:22   GAGACAAACCUAUUUCAAGAGU   1   =|=||||||||||||*|||||| targets:647   UUUUGUUUGGAUAAACUUCUCA   668 Target Full Sequence	1.5	PREDICTED: Glycine max clustered mitochondria protein-like (LOC102659429), transcript variant X2, mRNA	clustered mitochondria protein-like(LOC102659429)	coding protein	psRNATarget
XM_014779022.1	ncRNA:22   GAGACAAACCUAUUUCAAGAGU   1   =*|||||||||||||*|||||| targets:494   UCCUGUUUGGAUAAACUUCUCA   515 Target Full Sequence	1.5	PREDICTED: Glycine max cysteine synthase-like (LOC100796465), transcript variant X4, mRNA	cysteine synthase-like(LOC100796465)	coding protein	psRNATarget
XM_014779020.1	ncRNA:22   GAGACAAACCUAUUUCAAGAGU   1   =*|||||||||||||*|||||| targets:580   UCCUGUUUGGAUAAACUUCUCA   601 Target Full Sequence	1.5	PREDICTED: Glycine max cysteine synthase-like (LOC100796465), transcript variant X2, mRNA	cysteine synthase-like(LOC100796465)	coding protein	psRNATarget
XM_014779021.1	ncRNA:22   GAGACAAACCUAUUUCAAGAGU   1   =*|||||||||||||*|||||| targets:604   UCCUGUUUGGAUAAACUUCUCA   625 Target Full Sequence	1.5	PREDICTED: Glycine max cysteine synthase-like (LOC100796465), transcript variant X3, mRNA	cysteine synthase-like(LOC100796465)	coding protein	psRNATarget
XM_014779019.1	ncRNA:22   GAGACAAACCUAUUUCAAGAGU   1   =*|||||||||||||*|||||| targets:690   UCCUGUUUGGAUAAACUUCUCA   711 Target Full Sequence	1.5	PREDICTED: Glycine max cysteine synthase-like (LOC100796465), transcript variant X1, mRNA	cysteine synthase-like(LOC100796465)	coding protein	psRNATarget
BT091189.1	ncRNA:22   GAGACAAACCUAUUUCAAGAGU   1   =|*||||||||||||*|||||| targets:662   UUAUGUUUGGAUAAAUUUCUCA   683 Target Full Sequence	1.5	Soybean clone JCVI-FLGm-7I20 unknown mRNA	NA	coding protein	psRNATarget
XM_003521063.3	ncRNA:22   GAGACAAACCUAUUUCAAGAGU   1   *||||||||||||||*|||||* targets:1529   GUCUGUUUGGAUAAACUUCUCU   1550 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor PCL1-like (LOC100815363), mRNA	transcription factor PCL1-like(LOC100815363)	coding protein	psRNATarget

Reference

1	PMID:24475082 "Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014).