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BaseInfo

ncRNA ID gma-miR5042-3p
Species Glycine max
Class miRNA
Genome position chr18:10413896-10414046 [+]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 103 - UGGGGCUUGAUCCAAGAUAGG - 123
Stem-loop(if miRNA) AAAGAUGCAAA          G   A   -G    CAA   UUUUUAGCUUUCAAACCCCCUAUCUUGGAUCACAGCC
           AUUUUCAAGU UUC AGU  UUGA   CUA                                     C
           |||||||||| ||| |||  ||||   |||
           UGAAAGUUCG AAG UCG  GGAU   AGA                                     C
---GUCAAGUA          A   G   AA    ---   ACCUAGUUCGGGGUGAGGUUCGGGGUACUAUCCGUUA
Stem-loop sequence AAAGAUGCAAAAUUUUCAAGUGUUCAAGUGUUGACAACUAUUUUUAGCUUUCAAACCCCCUAUCUUGGAUCACAGCCCCAUUGCCUAUCAUGGGGCUUGGAGUGGGGCUUGAUCCAAGAUAGGAAGCUGGAAAGCUUGAAAGUAUGAACUG

Reference

1 PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome";
Radwan O, Liu Y, Clough SJ;
Mol Plant Microbe Interact. 24:958-972(2011).
2 PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons";
Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ;
PLoS One. 9:e86153(2014).