ncRNA ID | gma-miR5042-3p |
Species | Glycine max |
Class | miRNA |
Genome position | chr18:10413896-10414046 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 103 - UGGGGCUUGAUCCAAGAUAGG - 123 |
Stem-loop(if miRNA) |
AAAGAUGCAAA          G   A   -G    CAA   UUUUUAGCUUUCAAACCCCCUAUCUUGGAUCACAGCC            AUUUUCAAGU UUC AGU  UUGA   CUA                                     C            |||||||||| ||| |||  ||||   |||            UGAAAGUUCG AAG UCG  GGAU   AGA                                     C ---GUCAAGUA          A   G   AA    ---   ACCUAGUUCGGGGUGAGGUUCGGGGUACUAUCCGUUA |
Stem-loop sequence | AAAGAUGCAAAAUUUUCAAGUGUUCAAGUGUUGACAACUAUUUUUAGCUUUCAAACCCCCUAUCUUGGAUCACAGCCCCAUUGCCUAUCAUGGGGCUUGGAGUGGGGCUUGAUCCAAGAUAGGAAGCUGGAAAGCUUGAAAGUAUGAACUG |
1 | PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome"; Radwan O, Liu Y, Clough SJ; Mol Plant Microbe Interact. 24:958-972(2011). |
2 | PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014). |