| ncRNA ID | gma-miR5042-5p |
| Species | Glycine max |
| Class | miRNA |
| Genome position | chr18:10413896-10414046 [+] |
| Reference genome | v1.0 |
| Source | miRBase |
| Length | 22 |
| Mature sequence(if miRNA) | 61 - UAUCUUGGAUCACAGCCCCAUU - 82 |
| Stem-loop(if miRNA) |
AAAGAUGCAAA G A -G CAA UUUUUAGCUUUCAAACCCCCUAUCUUGGAUCACAGCC AUUUUCAAGU UUC AGU UUGA CUA C |||||||||| ||| ||| |||| ||| UGAAAGUUCG AAG UCG GGAU AGA C ---GUCAAGUA A G AA --- ACCUAGUUCGGGGUGAGGUUCGGGGUACUAUCCGUUA |
| Stem-loop sequence | AAAGAUGCAAAAUUUUCAAGUGUUCAAGUGUUGACAACUAUUUUUAGCUUUCAAACCCCCUAUCUUGGAUCACAGCCCCAUUGCCUAUCAUGGGGCUUGGAGUGGGGCUUGAUCCAAGAUAGGAAGCUGGAAAGCUUGAAAGUAUGAACUG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_006603175.1 |
|
1.0 | PREDICTED: Glycine max disease resistance RPP13-like protein 4 (LOC102666933), mRNA | disease resistance RPP13-like protein 4(LOC102666933) | coding protein | psRNATarget | |||||||||
| XM_006586501.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102664151 (LOC102664151), mRNA | uncharacterized LOC102664151(LOC102664151) | coding protein | psRNATarget | |||||||||
| XM_006585994.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102661060 (LOC102661060), mRNA | uncharacterized LOC102661060(LOC102661060) | coding protein | psRNATarget |
| 1 | PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome"; Radwan O, Liu Y, Clough SJ; Mol Plant Microbe Interact. 24:958-972(2011). |
| 2 | PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014). |