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BaseInfo

ncRNA ID	gma-miR4396
Species	Glycine max
Class	miRNA
Genome position	chr18:3402844-3402901 [-]
Reference genome	v1.0
Source	miRBase
Length	24
Mature sequence(if miRNA)	30 - UGUAGUUUCUAAGACGAUGCUGAC - 53
Stem-loop(if miRNA)	AU    A AAAUAUGUAGUUUCUAAGACG  GCUG C |||||||||||||||||||||  |||| UUUAUACAUUAAAGAUUCUGU  CGAU G                      CC    U
Stem-loop sequence	AAAUAUGUAGUUUCUAAGACGAUGCUGACGUUAGCCCUGUCUUAGAAAUUACAUAUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014767301.1	ncRNA:24   CAGUCGUAGCAGAAUCUUUGAUGU   1   ***|**|||||||||||||||||| targets:35   ACGAAAAUCGUCUUAGAAACUACA   58 Target Full Sequence	1.0	PREDICTED: Glycine max serine/threonine-protein phosphatase BSL3-like (LOC100814210), transcript variant X5, mRNA	serine/threonine-protein phosphatase BSL3-like(LOC100814210)	coding protein	psRNATarget
XM_003555775.3	ncRNA:24   CA---GUCGUAGCAGAAUCUUUGAUGU   1   ||---=|*||||*||||||=||||||| targets:2663   GUAAAUACCAUCAUCUUAGGAACUACA   2689 Target Full Sequence	2.5	PREDICTED: Glycine max protease 2 (LOC100820540), mRNA	protease 2(LOC100820540)	coding protein	psRNATarget
AK287419.1	ncRNA:24   CA---GUCGUAGCAGAAUCUUUGAUGU   1   ||---=|*||||*||||||=||||||| targets:2668   GUAAAUACCAUCAUCUUAGGAACUACA   2694 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-52-P21	NA	coding protein	psRNATarget

Reference

1	PMID:20122185 "Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010).