Search result

BaseInfo

ncRNA ID	gma-miR4355
Species	Glycine max
Class	miRNA
Genome position	chr18:1370780-1370939 [-]
Reference genome	v1.0
Source	miRBase
Length	22
Mature sequence(if miRNA)	6 - CACUGUUGUGCUGGGUGUACCA - 27
Stem-loop(if miRNA)	----                    U           A     A    - CA           -CAA    -A         AG     CUGGUACACCCAGCAUAACA GUGUAAUUCCA UUUUG CCUU C  UAAAGCUGAUA    AUUG  UAAUCCGUA  C     |||||||||||||||||||| ||||||||||| ||||| |||| |  |||||||||||    ||||  |||||||||  U     GACCAUGUGGGUCGUGUUGU CACGUUAAGGU AAAAC GGAA G  AUUUCGACUAU    UAAC  GUUAGGCAU  C UAAC                    -           G     -    A AC           UACC    CG         AA
Stem-loop sequence	CUGGUACACCCAGCAUAACAUGUGUAAUUCCAAUUUUGACCUUCCAUAAAGCUGAUACAAAUUGAUAAUCCGUAAGCUCAAUACGGAUUGGCCAAUCCAUUAUCAGCUUUACAGAAAGGCAAAAGUGGAAUUGCACUGUUGUGCUGGGUGUACCAGCAAU

Reference

1	PMID:20122185 "Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010).