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BaseInfo

ncRNA ID novel_osa_miR7815
Species Oryza sativa
Class miRNA
Genome position Chr1:41568689-41568832 [-]
Reference genome IRGSP-1.0
Source SRR2099745
Length 21
Mature sequence(if miRNA) 1 - UCGCAAAAUAGACUAGGGGUU - 21
Stem-loop(if miRNA) --       G                     -------                CAC    UGCUACA     GCU
  UCCCUAG CUAUUUUGCGAGACGAAUCUA       ACGAGGUAUAUUAAUC   GAUU       GUGAU   A
  ||||||| |||||||||||||||||||||       ||||||||||||||||   ||||       |||||   C
  GGGGAUC GAUAAAACGCUCUGCUUAGAU       UGCUCCAUAUAAUUAG   CUAA       UACUA   A
UU       A                     UGCUCAU                AUA    --UCACC     AUA
Stem-loop sequence UCCCUAGGCUAUUUUGCGAGACGAAUCUAACGAGGUAUAUUAAUCCACGAUUUGCUACAGUGAUGCUACAAUAAUCAUCCACUAAUCAUAGAUUAAUAUACCUCGUUACUCGUUAGAUUCGUCUCGCAAAAUAGACUAGGGGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015791996.1
ncRNA:21   UUGGGGAUCAGAUAAAACGCU   1
  |||||||||*|||||||||||
targets:303   AACCCCUAGACUAUUUUGCGA   323

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107276073 (LOC107276073), transcript variant X1, mRNA uncharacterized LOC107276073(LOC107276073) coding protein psRNATarget
XM_015791997.1
ncRNA:21   UUGGGGAUCAGAUAAAACGCU   1
  |||||||||*|||||||||||
targets:303   AACCCCUAGACUAUUUUGCGA   323

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107276073 (LOC107276073), transcript variant X2, mRNA uncharacterized LOC107276073(LOC107276073) coding protein psRNATarget