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BaseInfo

ncRNA ID	gma-miR1520c
Species	Glycine max
Class	miRNA
Genome position	chr17:37893185-37893324 [+]
Reference genome	v1.0
Source	miRBase
Length	23
Mature sequence(if miRNA)	108 - UUCAAUAAGAACGUGACACGUGA - 130
Stem-loop(if miRNA)	A                UA    G     ------UCAAU    AUAAUAAUACAUUUUAUUUUUUAUG AUG UGACUGUCACGUGUCA  UUCU AUUGA           AAAA                         G ||| ||||||||||||||||  |||| |||||           |||| UAC AUUGACAGUGCACAGU  AAGA UAACU           GUAC                         A    A                GC    A     UACUACAAACA    ACAGUACAAGACUAACCUACAGUUG
Stem-loop sequence	AUGAUGACUGUCACGUGUCAUAUUCUGAUUGAUCAAUAAAAAUAAUAAUACAUUUUAUUUUUUAUGGAGUUGACAUCCAAUCAGAACAUGACACAUGACAAACAUCAUUCAAUAAGAACGUGACACGUGACAGUUAACAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003533235.3	ncRNA:23   AGUGCACAGUGCAAGAAUAACUU   1   |==-|*|||||||||||||||=| targets:2894   UUG-GCGUCACGUUCUUAUUGGA   2915 Target Full Sequence	2.5	PREDICTED: Glycine max receptor-like protein kinase HSL1 (LOC100789972), mRNA	receptor-like protein kinase HSL1(LOC100789972)	coding protein	psRNATarget

Reference

1	PMID:18402695 "Novel and nodulation-regulated microRNAs in soybean roots"; Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O; BMC Genomics. 9:160(2008).