| ncRNA ID | gma-miR1520o |
| Species | Glycine max |
| Class | miRNA |
| Genome position | chr17:13700244-13700436 [+] |
| Reference genome | v1.0 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 145 - UCAUCGUCCAAUCAGAAUGUGACA - 168 |
| Stem-loop(if miRNA) |
U A A U G U UA UCUAUG AA UACAAAAGAAU UUGAUUGUCAUGUGUCACAUUCUGAUUGGAUGAU AC GUCAUGUGUUA GUUUUGAUU AA UUGAC GACGAUG A ||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| || ||||| ||||||| AUGUUUUCUUA AACUGACAGUGUACAGUGUAAGACUAACCUGCUA UG UAGUGUACAGU CAAGAUUAA UU AACUG UUGUUAU A A C C U G C GC ---UUG GU |
| Stem-loop sequence | UUACAAAAGAAUAUUGAUUGUCAUGUGUCACAUUCUGAUUGGAUGAUAACUGUCAUGUGUUAGGUUUUGAUUUAAUAUUGACUCUAUGGACGAUGAAAAUGUAUUGUUGUUGUCAACGUUCAAUUAGAACGUGACAUGUGAUUGUCAUCGUCCAAUCAGAAUGUGACAUGUGACAGUCAACAUUCUUUUGUAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_003518407.3 |
|
2.5 | PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC100803577), mRNA | UPF0481 protein At3g47200-like(LOC100803577) | coding protein | psRNATarget |
| 1 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |