ncRNA ID | gma-miR319l |
Species | Glycine max |
Class | miRNA |
Genome position | chr17:9436178-9436279 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 14 - UUGGACUGAAGGGAGCUCCUUC - 35 |
Stem-loop(if miRNA) |
U     G  C    AU            G   C        CCCU       C  GAAAG UG AGAA  AGGAGUUCCCUU CAG CCAAAACA    GCAUGAA U  ||||| || ||||  |||||||||||| ||| ||||||||    |||||||  CUUUC AC UCUU  UCCUCGAGGGAA GUC GGUUUUGU    UGUACUU A A     -  U    CU            -   A        ----       C |
Stem-loop sequence | UGAAAGGUGCAGAAAUAGGAGUUCCCUUGCAGCCCAAAACACCCUGCAUGAACUACUUCAUGUUGUUUUGGACUGAAGGGAGCUCCUUCUUCUUCACUUUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LQ242604.1 |
|
0.0 | Sequence 8599 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
JB170935.1 |
|
0.0 | Sequence 8599 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
HI410474.1 |
|
0.0 | Sequence 8599 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
BT098668.1 |
|
0.0 | Soybean clone JCVI-FLGm-12F22 unknown mRNA | NA | coding protein | psRNATarget |
1 | PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses"; Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R; BMC Genomics. 12:307(2011). |