Search result

BaseInfo

ncRNA ID ath-miR8184
Species Arabidopsis thaliana
Class miRNA
Genome position chr5:3311962-3312070 [-]
Reference genome TAIR10
Source miRBase
Length 21
Mature sequence(if miRNA) 13 - UUUGGUCUGAUUACGAAUGUA - 33
Stem-loop(if miRNA)   UG                                            G  UG
GU  ACCAUCAAUACAUUCGUAAUCAGACCAAAUCCAAGAGCUAUACG AU  U
||  |||||||||||||||||||||||||||||||||||||||||||| ||  U
CA  UGGUAGUUAUGUAAGCAUUAGUCUGGUUUAGGUUCUCGAUAUGU UA  G
  GU                                            G  CC
Stem-loop sequence GUUGACCAUCAAUACAUUCGUAAUCAGACCAAAUCCAAGAGCUAUACGGAUUGUUGCCAUGUGUAUAGCUCUUGGAUUUGGUCUGAUUACGAAUGUAUUGAUGGUUGAC

Reference

1 PMID:24119003
"Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots";
Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutierrez RA;
BMC Genomics. 14:701(2013).