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BaseInfo

ncRNA ID	gma-miR396d
Species	Glycine max
Class	miRNA
Genome position	chr17:9053049-9053156 [-]
Reference genome	v1.0
Source	miRBase
Length	24
Mature sequence(if miRNA)	3 - AAGAAAGCUGUGGGAGAAUAUGGC - 26
Stem-loop(if miRNA)	-G      C                   A     UAU  AUCUUAUAUCUCUC   GUCAUG UUUUCCACAGCUUUCUUGA CUUCU   GC              C   |||||| ||||||||||||||||||| |||||   ||              A   CGGUAU AGAGGGUGUCGAAAGAACU GAAGA   CG              C AA      A                   C     UCC  AAUUUUACGACCUU
Stem-loop sequence	GGUCAUGCUUUUCCACAGCUUUCUUGAACUUCUUAUGCAUCUUAUAUCUCUCCACUUCCAGCAUUUUAAGCCCUAGAAGCUCAAGAAAGCUGUGGGAGAAUAUGGCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT092755.1	ncRNA:24   CGGUAUAAGAGGGUGUCGAAAGAA   1   *===||||||=||||||||||||| targets:184   UUUGUAUUCUUCCACAGCUUUCUU   207 Target Full Sequence	1.0	Soybean clone JCVI-FLGm-11N21 unknown mRNA	NA	coding protein	psRNATarget
JB171049.1	ncRNA:24   CGGUAUAAGAGGGUGUCGAAAGAA   1   *=|=|=*|||=||||||||||||| targets:2   UUCGUGAUCUUCCACAGCUUUCUU   25 Target Full Sequence	3.0	Sequence 8713 from Patent EP2559767	NA	coding protein	psRNATarget
HI410588.1	ncRNA:24   CGGUAUAAGAGGGUGUCGAAAGAA   1   *=|=|=*|||=||||||||||||| targets:2   UUCGUGAUCUUCCACAGCUUUCUU   25 Target Full Sequence	3.0	Sequence 8713 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242718.1	ncRNA:24   CGGUAUAAGAGGGUGUCGAAAGAA   1   *=|=|=*|||=||||||||||||| targets:2   UUCGUGAUCUUCCACAGCUUUCUU   25 Target Full Sequence	3.0	Sequence 8713 from Patent EP2985353	NA	coding protein	psRNATarget

Reference

1	PMID:20122185 "Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010).