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BaseInfo

ncRNA ID gma-miR396i-3p
Species Glycine max
Class miRNA
Genome position chr17:9044850-9044984 [+]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 100 - GUUCAAUAAAGCUGUGGGAAG - 120
Stem-loop(if miRNA) U      C       UC            C          -UC  ------------U     U    U   U
 GGCCCU UUUGUAU  UUCCACAGCUUU UUGAACUGCA   CA             AGAGU CCUU GCA G
 |||||| |||||||  |||||||||||| ||||||||||   ||             ||||| |||| |||
 CUGGGA AGACAUA  AGGGUGUCGAAA AACUUGGCGU   GU             UCUCA GGAA CGU C
A      U       GA            U          UUU  UCCACACCCUCGU     C    C   A
Stem-loop sequence UGGCCCUCUUUGUAUUCUUCCACAGCUUUCUUGAACUGCAUCCAUAGAGUUCCUUUGCAUGCAUGCCAAGGCACUCUUGCUCCCACACCUUGUUUUGCGGUUCAAUAAAGCUGUGGGAAGAUACAGAUAGGGUCA

Reference

1 PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses";
Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R;
BMC Genomics. 12:307(2011).