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BaseInfo

ncRNA ID	gma-miR1507b
Species	Glycine max
Class	miRNA
Genome position	chr17:6190604-6190701 [+]
Reference genome	v1.0
Source	miRBase
Length	21
Mature sequence(if miRNA)	72 - UCUCAUUCCAUACAUCGUCUG - 92
Stem-loop(if miRNA)	A    -                  A     AU  UAUU UC     GUUUG CAGA GAUGUAUGGAGUGAGAGA GGGAA  GA    U  CGAUC ||||| |||| |||||||||||||||||| |||||  ||    |  ||||C CAAGC GUCU CUACAUACCUUACUCUCU CCCUU  CU    A  GCUAC      A    G                  -     CU  ---C UU
Stem-loop sequence	GUUUGACAGAGAUGUAUGGAGUGAGAGAAGGGAAAUGAUAUUUUCCGAUCCCAUCGUUACUCUCUUCCCUCUCUCAUUCCAUACAUCGUCUGACGAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB171050.1	ncRNA:21   GUCUGCUACAUACCUUACUCU   1   ||||||||||||||||||||| targets:12   CAGACGAUGUAUGGAAUGAGA   32 Target Full Sequence	0.0	Sequence 8714 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242701.1	ncRNA:21   GUCUGCUACAUACCUUACUCU   1   ||||||||||||||||||||| targets:12   CAGACGAUGUAUGGAAUGAGA   32 Target Full Sequence	0.0	Sequence 8696 from Patent EP2985353	NA	coding protein	psRNATarget
JB171032.1	ncRNA:21   GUCUGCUACAUACCUUACUCU   1   ||||||||||||||||||||| targets:12   CAGACGAUGUAUGGAAUGAGA   32 Target Full Sequence	0.0	Sequence 8696 from Patent EP2559767	NA	coding protein	psRNATarget
HI410589.1	ncRNA:21   GUCUGCUACAUACCUUACUCU   1   ||||||||||||||||||||| targets:12   CAGACGAUGUAUGGAAUGAGA   32 Target Full Sequence	0.0	Sequence 8714 from Patent EP2074227	NA	coding protein	psRNATarget
HI410571.1	ncRNA:21   GUCUGCUACAUACCUUACUCU   1   ||||||||||||||||||||| targets:12   CAGACGAUGUAUGGAAUGAGA   32 Target Full Sequence	0.0	Sequence 8696 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242719.1	ncRNA:21   GUCUGCUACAUACCUUACUCU   1   ||||||||||||||||||||| targets:12   CAGACGAUGUAUGGAAUGAGA   32 Target Full Sequence	0.0	Sequence 8714 from Patent EP2985353	NA	coding protein	psRNATarget
XM_014775374.1	ncRNA:21   GUCUGCUACAUACCUUACUCU   1   *||||*|*||||||||||||| targets:3256   AAGACUAAGUAUGGAAUGAGA   3276 Target Full Sequence	2.0	PREDICTED: Glycine max mediator of RNA polymerase II transcription subunit 33B-like (LOC100783353), transcript variant X2, mRNA	mediator of RNA polymerase II transcription subunit 33B-like(LOC100783353)	coding protein	psRNATarget
XM_003525638.3	ncRNA:21   GUCUGCUACAUACCUUACUCU   1   *||||*|*||||||||||||| targets:3472   AAGACUAAGUAUGGAAUGAGA   3492 Target Full Sequence	2.0	PREDICTED: Glycine max mediator of RNA polymerase II transcription subunit 33B-like (LOC100783353), transcript variant X1, mRNA	mediator of RNA polymerase II transcription subunit 33B-like(LOC100783353)	coding protein	psRNATarget
XM_006591252.2	ncRNA:21   GUCUGCUACAUACCUUACUCU   1   ==||=|||||=|||||||||| targets:879   UGGAUGAUGUGUGGAAUGAGA   899 Target Full Sequence	2.5	PREDICTED: Glycine max disease resistance protein RGA2-like (LOC100810734), mRNA	disease resistance protein RGA2-like(LOC100810734)	coding protein	psRNATarget

Reference

1	PMID:19084500 "Identification and expression analysis of miRNAs from nitrogen-fixing soybean nodules"; Wang Y, Li P, Cao X, Wang X, Zhang A, Li X; Biochem Biophys Res Commun. 378:799-803(2009).
2	PMID:24475082 "Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014).