| ncRNA ID | gma-miR171q |
| Species | Glycine max |
| Class | miRNA |
| Genome position | chr17:1007461-1007569 [+] |
| Reference genome | v1.0 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 74 - UUGAGCCGUGCCAAUAUCACA - 94 |
| Stem-loop(if miRNA) |
-U ------ U A UG -- G U AUG GAGA AC UG GAUAUUGG CGGUUCAAUCAGA A GCAG GUUUU A |||| || || |||||||| ||||||||||||| | |||| ||||| CUCU UG AC CUAUAACC GCCGAGUUAGUUU U UGUC CAAAA U GG ACUUAA U A GU AU G U ACC |
| Stem-loop sequence | UGAGAACUUGAGAUAUUGGUGCGGUUCAAUCAGAAGGCAGUGUUUUAUGAUCCAAAAACUCUGUGUUAUUUGAUUGAGCCGUGCCAAUAUCACAUGUAAUUCAUCUCGG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_006573169.2 |
|
2.5 | PREDICTED: Glycine max scarecrow-like protein 27 (LOC100792973), mRNA | scarecrow-like protein 27(LOC100792973) | coding protein | psRNATarget | |||||||||
| XM_014773107.1 |
|
2.5 | PREDICTED: Glycine max scarecrow-like protein 6 (LOC100805945), mRNA | scarecrow-like protein 6(LOC100805945) | coding protein | psRNATarget | |||||||||
| XM_006576371.2 |
|
2.5 | PREDICTED: Glycine max scarecrow-like protein 6 (LOC100794596), mRNA | scarecrow-like protein 6(LOC100794596) | coding protein | psRNATarget | |||||||||
| XM_003516392.3 |
|
2.5 | PREDICTED: Glycine max scarecrow-like protein 6 (LOC100801785), mRNA | scarecrow-like protein 6(LOC100801785) | coding protein | psRNATarget |
| 1 | PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs"; Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC; Genes Dev. 25:2540-2553(2011). |