| ncRNA ID | gma-miR396j |
| Species | Glycine max |
| Class | miRNA |
| Genome position | chr16:31162190-31162323 [-] |
| Reference genome | v1.0 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 11 - AUUCAAGAUAGCUGUGGAAAA - 31 |
| Stem-loop(if miRNA) |
G C C U -C -- U UGUUGUGAGGCUUCUCCAGUGAAGG GUUUU GUGAU UUCCACAGUU UCUUGAA UGCA UG G U ||||| ||||| |||||||||| ||||||| |||| || | U UAGAG CACUA AAGGUGUCGA AGAACUU CACG UA U U - U A U AA AG - CUUAUAGACGUGAACGUAUCCUCUA |
| Stem-loop sequence | GGUUUUCGUGAUCUUCCACAGUUUUCUUGAACUGCAUGUGUGUUGUGAGGCUUCUCCAGUGAAGGUUUAUCUCCUAUGCAAGUGCAGAUAUUCUAUGAGCACAAUUCAAGAUAGCUGUGGAAAAUCACUGAGAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HI410588.1 |
|
2.5 | Sequence 8713 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
| LQ242718.1 |
|
2.5 | Sequence 8713 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
| JB171049.1 |
|
2.5 | Sequence 8713 from Patent EP2559767 | NA | coding protein | psRNATarget |
| 1 | PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs"; Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC; Genes Dev. 25:2540-2553(2011). |