| ncRNA ID | gma-miR5379 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | chr16:28536014-28536181 [-] |
| Reference genome | v1.0 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 13 - AUGAAAAUCAUUCAUUAUGAUAUC - 36 |
| Stem-loop(if miRNA) |
A C AUA A UAU UU CAUU C UU CACGUCAUCAC GA AUCAUAAUGAAUGAUUUUCAUGUUU UUUAAAUU GUUGU AUGU GU UGAAUUUGA AC A ||||||||||| || ||||||||||||||||||||||||| |||||||| ||||| |||| || ||||||||| || A GUGCAGUAGUG CU UAGUAUUACUUACUAAAAGUACAGA AAAUUUAA CAACA UACA CA AUUUAAACU UG U C A GAC A --- UU ---U - UU |
| Stem-loop sequence | CACGUCAUCACAGACAUCAUAAUGAAUGAUUUUCAUGUUUAUAUUUAAAUUAGUUGUUAUAUGUUUGUCAUUUGAAUUUGACACUUAAUUUGUUCAAAUUUAUACUUACAUACAACAAAUUUAAACAGAGACAUGAAAAUCAUUCAUUAUGAUAUCCGUGAUGACGUG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_014778059.1 |
|
1.5 | PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102659357), mRNA | serine/threonine-protein phosphatase 7 long form homolog(LOC102659357) | coding protein | psRNATarget | |||||||||
| XM_014762462.1 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC106794691 (LOC106794691), mRNA | uncharacterized LOC106794691(LOC106794691) | coding protein | psRNATarget |
| 1 | PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses"; Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R; BMC Genomics. 12:307(2011). |