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BaseInfo

ncRNA ID gma-miR9737
Species Glycine max
Class miRNA
Genome position chr16:14712777-14712889 [+]
Reference genome v1.0
Source miRBase
Length 22
Mature sequence(if miRNA) 6 - UUGUGGCUGAAAUCACUGUUGC - 27
Stem-loop(if miRNA) -         G          CU  U    A  C       -----UA  CUUGAGGG
 UGACGUUGU GCUGAAAUCA  GU GCAG CC UUUUUUA       AC        U
 ||||||||| ||||||||||  || |||| || |||||||       ||        A
 ACUGUAACG CGACUUUAGU  CA CGUC GG AAAAGAU       CU        U
A         A          AU  U    C  U       UUUAAUA  ACUGAGAA
Stem-loop sequence UGACGUUGUGGCUGAAAUCACUGUUGCAGACCCUUUUUUAUAACCUUGAGGGUAUAAGAGUCAUCAUAAUUUUAGAAAAUGGCCUGCUACUAUGAUUUCAGCAGCAAUGUCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006603763.2
ncRNA:22   CGUUGUCACUAAAGUCGGUGUU   1
  *||||*||||||||=|||||||
targets:1787   ACAACCGUGAUUUCGGCCACAA   1808

2.5 PREDICTED: Glycine max RING-H2 finger protein ATL46-like (LOC100787206), transcript variant X4, mRNA RING-H2 finger protein ATL46-like(LOC100787206) coding protein psRNATarget

Reference

1 PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons";
Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ;
PLoS One. 9:e86153(2014).