ncRNA ID | gma-miR1526 |
Species | Glycine max |
Class | miRNA |
Genome position | chr16:6095457-6095630 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 143 - CCGGAAGAGGAAAAUUAAGCAA - 164 |
Stem-loop(if miRNA) |
----AACAAAAAU    U                  A           ----     C    C             AGAG     C     A              UUUA UUUUCUUCUUCCGGAUCA GUUGAUCCGGA    UCUUC GGAU AACUUGAUCCGUA    ACUUC GGAUU A              |||| |||||||||||||||||| |||||||||||    ||||| |||| |||||||||||||    ||||| ||||| G              GAAU AAAAGGAGAAGGCCUAGU CAACUAGGCUU    AGAAG CCUA UUGAACUAGGCAU    UGAAG CCUAG U UUUUAAUAGGAAC    U                  -           UCAG     A    A             ----     A     U |
Stem-loop sequence | AACAAAAAUUUUAUUUUUCUUCUUCCGGAUCAAGUUGAUCCGGAUCUUCCGGAUCAACUUGAUCCGUAAGAGACUUCCGGAUUAAGUUGAUCCAGAAGUUACGGAUCAAGUUAAUCCAGAAGAGACUUUCGGAUCAACUGAUCCGGAAGAGGAAAAUUAAGCAAGGAUAAUUUU |
1 | PMID:18402695
"Novel and nodulation-regulated microRNAs in soybean roots"; Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O; BMC Genomics. 9:160(2008). |