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BaseInfo

ncRNA ID gma-miR1526
Species Glycine max
Class miRNA
Genome position chr16:6095457-6095630 [+]
Reference genome v1.0
Source miRBase
Length 22
Mature sequence(if miRNA) 143 - CCGGAAGAGGAAAAUUAAGCAA - 164
Stem-loop(if miRNA) ----AACAAAAAU    U                  A           ----     C    C             AGAG     C     A
             UUUA UUUUCUUCUUCCGGAUCA GUUGAUCCGGA    UCUUC GGAU AACUUGAUCCGUA    ACUUC GGAUU A
             |||| |||||||||||||||||| |||||||||||    ||||| |||| |||||||||||||    ||||| ||||| G
             GAAU AAAAGGAGAAGGCCUAGU CAACUAGGCUU    AGAAG CCUA UUGAACUAGGCAU    UGAAG CCUAG U
UUUUAAUAGGAAC    U                  -           UCAG     A    A             ----     A     U
Stem-loop sequence AACAAAAAUUUUAUUUUUCUUCUUCCGGAUCAAGUUGAUCCGGAUCUUCCGGAUCAACUUGAUCCGUAAGAGACUUCCGGAUUAAGUUGAUCCAGAAGUUACGGAUCAAGUUAAUCCAGAAGAGACUUUCGGAUCAACUGAUCCGGAAGAGGAAAAUUAAGCAAGGAUAAUUUU

Reference

1 PMID:18402695
"Novel and nodulation-regulated microRNAs in soybean roots";
Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O;
BMC Genomics. 9:160(2008).