ncRNA ID | gma-miR159f-5p |
Species | Glycine max |
Class | miRNA |
Genome position | chr16:2794128-2794307 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 150 - GAGUUCCCUGCACUCCAAGUC - 170 |
Stem-loop(if miRNA) |
    AAG            G        GU UG     A  UGAU       C  UG  G    U     G U   UC    C   U   AA ACCC   UUGGAGUUCCCU CACUCCAA  C  AAAGG UA    GGUAAAC UC  CU CUAG UCAUG A ACC  UGGC UCG AAC  C ||||   |||||||||||| ||||||||  |  ||||| ||    ||||||| ||  || |||| ||||| | |||  |||| ||| |||  A UGGG   GACCUCGAGGGA GUGAGGUU  G  UUUCC GU    CCAUUUG AG  GA GGUC AGUAC U UGG  ACUG AGC UUG  U     --A            A        AU GU     A  ---U       -  UA  G    C     G U   GA    A   -   CG |
Stem-loop sequence | ACCCAAGUUGGAGUUCCCUGCACUCCAAGUCUGAAAGGAUAUGAUGGUAAACCUCUGCUGCUAGUUCAUGGAUACCUCUGGCCUCGUAACAACAUGCGUUCGAAGUCAAGGGUUUGCAUGACCUGGGAGAUGAGUUUACCUUGACCUUUUGGUAUUGGAGUGAAGGGAGCUCCAGAGGGU |
1 | PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses"; Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R; BMC Genomics. 12:307(2011). |