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BaseInfo

ncRNA ID gma-miR159f-5p
Species Glycine max
Class miRNA
Genome position chr16:2794128-2794307 [-]
Reference genome v1.0
Source miRBase
Length 21
Mature sequence(if miRNA) 150 - GAGUUCCCUGCACUCCAAGUC - 170
Stem-loop(if miRNA)     AAG            G        GU UG     A  UGAU       C  UG  G    U     G U   UC    C   U   AA
ACCC   UUGGAGUUCCCU CACUCCAA  C  AAAGG UA    GGUAAAC UC  CU CUAG UCAUG A ACC  UGGC UCG AAC  C
||||   |||||||||||| ||||||||  |  ||||| ||    ||||||| ||  || |||| ||||| | |||  |||| ||| |||  A
UGGG   GACCUCGAGGGA GUGAGGUU  G  UUUCC GU    CCAUUUG AG  GA GGUC AGUAC U UGG  ACUG AGC UUG  U
    --A            A        AU GU     A  ---U       -  UA  G    C     G U   GA    A   -   CG
Stem-loop sequence ACCCAAGUUGGAGUUCCCUGCACUCCAAGUCUGAAAGGAUAUGAUGGUAAACCUCUGCUGCUAGUUCAUGGAUACCUCUGGCCUCGUAACAACAUGCGUUCGAAGUCAAGGGUUUGCAUGACCUGGGAGAUGAGUUUACCUUGACCUUUUGGUAUUGGAGUGAAGGGAGCUCCAGAGGGU

Reference

1 PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses";
Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R;
BMC Genomics. 12:307(2011).