ncRNA ID | gma-miR166a-5p |
Species | Glycine max |
Class | miRNA |
Genome position | chr16:1912570-1912715 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 104 - GGAAUGUUGUCUGGCUCGAGG - 124 |
Stem-loop(if miRNA) |
-AC      UU   CUU   A        UU      CU   G   C  -UCUUCA        --UU      A    GGAAGC  UGU   UUG GGGGAAUG  GUCUGG  CGA GAC CU       UCUUGAUC    GUGUAG C    ||||||  |||   ||| ||||||||  ||||||  ||| ||| ||       ||||||||    ||||||    CCUUCG  AUA   AAC CCCCUUAC  CGGACC  GCU UUG GA       GGAACUGG    CGUAUC U AAA      -U   -UU   C        UU      AG   G   U  UACAUAA        UGUU      A |
Stem-loop sequence | ACGGAAGCUUUGUCUUUUGAGGGGAAUGUUGUCUGGCUCGAGGACCCUUCUUCAUCUUGAUCUUGUGUAGACUACUAUGCUUGUGGUCAAGGAAUACAUAGUGUUGUCGGACCAGGCUUCAUUCCCCCCAAUUAUAUGCUUCCAAA |
1 | PMID:18402695
"Novel and nodulation-regulated microRNAs in soybean roots"; Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O; BMC Genomics. 9:160(2008). |
2 | PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses"; Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R; BMC Genomics. 12:307(2011). |