| ncRNA ID | gma-miR169n-3p |
| Species | Glycine max |
| Class | miRNA |
| Genome position | chr15:14150069-14150183 [+] |
| Reference genome | v1.0 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 87 - UGCCGGCAAGUUUCUCUUGGC - 107 |
| Stem-loop(if miRNA) |
C U CACU C UU A GGAGUG AGCCAAGGG GAUUUGCCGGCACAGG AAUUAGUU AAUA GAAU G |||||| ||||||||| |||||||||||||||| |||||||| |||| |||| U CUUUAC UCGGUUCUC UUGAACGGCCGUGUCU UUAGUUAG UUGU CUUG U A U UCAU U -- A |
| Stem-loop sequence | GGAGUGCAGCCAAGGGUGAUUUGCCGGCACAGGCACUAAUUAGUUCAAUAUUGAAUAGUUAGUUCUGUUUGAUUGAUUUACUUCUGUGCCGGCAAGUUUCUCUUGGCUACAUUUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_006594895.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100795370 (LOC100795370), transcript variant X1, mRNA | uncharacterized LOC100795370(LOC100795370) | coding protein | psRNATarget | |||||||||
| XM_006594898.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100795370 (LOC100795370), transcript variant X3, mRNA | uncharacterized LOC100795370(LOC100795370) | coding protein | psRNATarget | |||||||||
| XM_006594896.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100795370 (LOC100795370), transcript variant X2, mRNA | uncharacterized LOC100795370(LOC100795370) | coding protein | psRNATarget |
| 1 | PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses"; Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R; BMC Genomics. 12:307(2011). |
| 2 | PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014). |