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BaseInfo

ncRNA ID gma-miR4347
Species Glycine max
Class miRNA
Genome position chr15:12763780-12763920 [+]
Reference genome v1.0
Source miRBase
Length 24
Mature sequence(if miRNA) 10 - AAGCUUCUUACGGAUCAAGUUGAU - 33
Stem-loop(if miRNA) U      A           C              C  A        UU  C      C            
 UGGUUC CAAGCUUCUUA GGAUCAAGUUGAUC GU AGCUUCUU  GC GAUCAA UUGAUUCGUAAGA
 |||||| ||||||||||| |||||||||||||| || ||||||||  || |||||| ||||||||||||A
 ACUAAG GUUCGAAGAAU CUUAGUUCAACUAG CG UCGAAGAG  UG CUAGUU AACUAGGCGUUCG
A      C           A              A  A        --  C      U            
Stem-loop sequence UUGGUUCACAAGCUUCUUACGGAUCAAGUUGAUCCGUAAGCUUCUUUUGCCGAUCAACUUGAUUCGUAAGAAGCUUGCGGAUCAAUUUGAUCCGUGAGAAGCUAGCAGAUCAACUUGAUUCAUAAGAAGCUUGCGAAUCAA

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).