ncRNA ID | gma-miR4347 |
Species | Glycine max |
Class | miRNA |
Genome position | chr15:12763780-12763920 [+] |
Reference genome | v1.0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 10 - AAGCUUCUUACGGAUCAAGUUGAU - 33 |
Stem-loop(if miRNA) |
U      A           C              C  A        UU  C      C              UGGUUC CAAGCUUCUUA GGAUCAAGUUGAUC GU AGCUUCUU  GC GAUCAA UUGAUUCGUAAGA  |||||| ||||||||||| |||||||||||||| || ||||||||  || |||||| ||||||||||||A  ACUAAG GUUCGAAGAAU CUUAGUUCAACUAG CG UCGAAGAG  UG CUAGUU AACUAGGCGUUCG A      C           A              A  A        --  C      U             |
Stem-loop sequence | UUGGUUCACAAGCUUCUUACGGAUCAAGUUGAUCCGUAAGCUUCUUUUGCCGAUCAACUUGAUUCGUAAGAAGCUUGCGGAUCAAUUUGAUCCGUGAGAAGCUAGCAGAUCAACUUGAUUCAUAAGAAGCUUGCGAAUCAA |
1 | PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010). |