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BaseInfo

ncRNA ID	gma-miR171f
Species	Glycine max
Class	miRNA
Genome position	chr15:8464113-8464202 [-]
Reference genome	v1.0
Source	miRBase
Length	21
Mature sequence(if miRNA)	11 - UGAUUGAGCCGUGCCAAUAUC - 31
Stem-loop(if miRNA)	--------GA                       -   C  U     AUG           GAUAUUGGUACGGUUCAAUCAGA AGG AG GCUUU   A           ||||||||||||||||||||||| ||| || |||||           CUAUAACCGUGCCGAGUUAGUUU UUC UC CGAAA   U CAAACGUACA                       A   -  U     CUU
Stem-loop sequence	GAGAUAUUGGUACGGUUCAAUCAGAAGGCAGUGCUUUAUGAUUUCAAAGCUCUCUUAUUUGAUUGAGCCGUGCCAAUAUCACAUGCAAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014773107.1	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   |||||||||=||||||||||| targets:1516   GAUAUUGGCGCGGCUCAAUCA   1536 Target Full Sequence	1.5	PREDICTED: Glycine max scarecrow-like protein 6 (LOC100805945), mRNA	scarecrow-like protein 6(LOC100805945)	coding protein	psRNATarget
XM_006573169.2	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   |||||||||=||||||||||| targets:1754   GAUAUUGGCGCGGCUCAAUCA   1774 Target Full Sequence	1.5	PREDICTED: Glycine max scarecrow-like protein 27 (LOC100792973), mRNA	scarecrow-like protein 27(LOC100792973)	coding protein	psRNATarget
XM_006576371.2	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   |||||||||=||||||||||| targets:1633   GAUAUUGGCGCGGCUCAAUCA   1653 Target Full Sequence	1.5	PREDICTED: Glycine max scarecrow-like protein 6 (LOC100794596), mRNA	scarecrow-like protein 6(LOC100794596)	coding protein	psRNATarget
XM_003516392.3	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   |||||||||=||||||||||| targets:1783   GAUAUUGGCGCGGCUCAAUCA   1803 Target Full Sequence	1.5	PREDICTED: Glycine max scarecrow-like protein 6 (LOC100801785), mRNA	scarecrow-like protein 6(LOC100801785)	coding protein	psRNATarget
XM_014763627.1	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   *|**|||*||||||||||||| targets:281   CACUUUGCCACGGCUCAAUCA   301 Target Full Sequence	3.0	PREDICTED: Glycine max cysteine-rich repeat secretory protein 55-like (LOC106795088), mRNA	cysteine-rich repeat secretory protein 55-like(LOC106795088)	coding protein	psRNATarget
XM_006591692.1	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   *|**|||*||||||||||||| targets:202   CACUUUGCCACGGCUCAAUCA   222 Target Full Sequence	3.0	PREDICTED: Glycine max cysteine-rich receptor-like protein kinase 2 (LOC100816244), mRNA	cysteine-rich receptor-like protein kinase 2(LOC100816244)	coding protein	psRNATarget
XM_006591698.1	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   *|**|||*||||||||||||| targets:202   CACUUUGCCACGGCUCAAUCA   222 Target Full Sequence	3.0	PREDICTED: Glycine max cysteine-rich receptor-like protein kinase 2 (LOC100776689), mRNA	cysteine-rich receptor-like protein kinase 2(LOC100776689)	coding protein	psRNATarget
XM_014764184.1	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   *|**|||*||||||||||||| targets:302   CACUUUGCCACGGCUCAAUCA   322 Target Full Sequence	3.0	PREDICTED: Glycine max cysteine-rich receptor-like protein kinase 2 (LOC100784716), transcript variant X2, mRNA	cysteine-rich receptor-like protein kinase 2(LOC100784716)	coding protein	psRNATarget
XM_014764181.1	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   *|**|||*||||||||||||| targets:299   CACUUUGUCACGGCUCAAUCA   319 Target Full Sequence	3.0	PREDICTED: Glycine max cysteine-rich receptor-like protein kinase 2 (LOC100816764), mRNA	cysteine-rich receptor-like protein kinase 2(LOC100816764)	coding protein	psRNATarget
XM_003537359.3	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   *|**|||*||||||||||||| targets:301   CACUUUGCCACGGCUCAAUCA   321 Target Full Sequence	3.0	PREDICTED: Glycine max cysteine-rich receptor-like protein kinase 2 (LOC100784716), transcript variant X3, mRNA	cysteine-rich receptor-like protein kinase 2(LOC100784716)	coding protein	psRNATarget
XM_006591224.2	ncRNA:21   CUAUAACCGUGCCGAGUUAGU   1   *|**|||*||||||||||||| targets:302   CACUUUGCCACGGCUCAAUCA   322 Target Full Sequence	3.0	PREDICTED: Glycine max cysteine-rich receptor-like protein kinase 2 (LOC100784716), transcript variant X1, mRNA	cysteine-rich receptor-like protein kinase 2(LOC100784716)	coding protein	psRNATarget

Reference

1	PMID:21504877 "MicroRNAs in the shoot apical meristem of soybean"; Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL; J Exp Bot. 62:2495-2506(2011).