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BaseInfo

ncRNA ID gma-miR396f
Species Glycine max
Class miRNA
Genome position chr15:556691-556841 [-]
Reference genome v1.0
Source miRBase
Length 25
Mature sequence(if miRNA) 66 - AGCUUUCUUGAACUUCUUAUGCCUA - 90
Stem-loop(if miRNA) UAGCUUC       ----UUU  ACUUCCAUGCUUGCUUGAACAAGUCCUGUUAUGCUUUUCCACAGCUUUCUUGAACUU
       UUCAGCA       CA                                                         C
       |||||||       ||
       UCAGGAU       GU                                                         U
-------       CUAAACU  ACAAAAAGGUGUAAAAAGAAUUUGAAGUUACGGUGUAGUUAUCGACGUAAUCCGUAU
Stem-loop sequence UAGCUUCUUCAGCAUUUCAACUUCCAUGCUUGCUUGAACAAGUCCUGUUAUGCUUUUCCACAGCUUUCUUGAACUUCUUAUGCCUAAUGCAGCUAUUGAUGUGGCAUUGAAGUUUAAGAAAAAUGUGGAAAAACAUGUCAAAUCUAGGACU

Reference

1 PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome";
Radwan O, Liu Y, Clough SJ;
Mol Plant Microbe Interact. 24:958-972(2011).
2 PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses";
Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R;
BMC Genomics. 12:307(2011).