ncRNA ID | gma-miR396f |
Species | Glycine max |
Class | miRNA |
Genome position | chr15:556691-556841 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 25 |
Mature sequence(if miRNA) | 66 - AGCUUUCUUGAACUUCUUAUGCCUA - 90 |
Stem-loop(if miRNA) |
UAGCUUC       ----UUU  ACUUCCAUGCUUGCUUGAACAAGUCCUGUUAUGCUUUUCCACAGCUUUCUUGAACUU        UUCAGCA       CA                                                         C        |||||||       ||        UCAGGAU       GU                                                         U -------       CUAAACU  ACAAAAAGGUGUAAAAAGAAUUUGAAGUUACGGUGUAGUUAUCGACGUAAUCCGUAU |
Stem-loop sequence | UAGCUUCUUCAGCAUUUCAACUUCCAUGCUUGCUUGAACAAGUCCUGUUAUGCUUUUCCACAGCUUUCUUGAACUUCUUAUGCCUAAUGCAGCUAUUGAUGUGGCAUUGAAGUUUAAGAAAAAUGUGGAAAAACAUGUCAAAUCUAGGACU |
1 | PMID:21751852
"Transcriptional analysis of soybean root response to Fusarium virguliforme, the causal agent of sudden death syndrome"; Radwan O, Liu Y, Clough SJ; Mol Plant Microbe Interact. 24:958-972(2011). |
2 | PMID:21663675
"Identification of novel soybean microRNAs involved in abiotic and biotic stresses"; Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R; BMC Genomics. 12:307(2011). |