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BaseInfo

ncRNA ID	gma-miR9734
Species	Glycine max
Class	miRNA
Genome position	chr14:49068347-49068538 [+]
Reference genome	v1.0
Source	miRBase
Length	24
Mature sequence(if miRNA)	118 - UCGUGAAUGAGAUUUGUGUUGCUU - 141
Stem-loop(if miRNA)	-AA   U       A  GA   A           C      -  C                              A       UAUUUU       --  G    GGG GUGUAGU GA  AAU UCAUAGAAAGU AACUAU CU UAUAAAUUAAGCAACACAAAUUUCAUUCAC AUGGGUA      UGUUAUU  AG U    ||| ||||||| ||  ||| ||||||||||| |||||| || |||||||||||||||||||||||||||||| |||||||      |||||||  ||    CCC CACAUCA CU  UUA AGUAUCUUUUA UUGAUA GA AUAUUUAAUUCGUUGUGUUUAGAGUAAGUG UACUCGU      ACAAUGA  UC G UCC   -       C  UC   A           A      A  -                              C       ------       AU  A
Stem-loop sequence	AAGGGUGUGUAGUAGAGAAAUAUCAUAGAAAGUCAACUAUCUCUAUAAAUUAAGCAACACAAAUUUCAUUCACAAUGGGUAUAUUUUUGUUAUUAGGUGACUUAAGUAACAUGCUCAUCGUGAAUGAGAUUUGUGUUGCUUAAUUUAUAAGAAUAGUUAAUUUUCUAUGAAAUUCUUCCACUACACCCCCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014762009.1	ncRNA:22   GAGACAAACCUAUUUCAAGAGU   1   =|=||||||||||||*|||||| targets:647   UUUUGUUUGGAUAAACUUCUCA   668 Target Full Sequence	1.5	PREDICTED: Glycine max clustered mitochondria protein-like (LOC102659429), transcript variant X2, mRNA	clustered mitochondria protein-like(LOC102659429)	coding protein	psRNATarget
XM_014779022.1	ncRNA:22   GAGACAAACCUAUUUCAAGAGU   1   =*|||||||||||||*|||||| targets:494   UCCUGUUUGGAUAAACUUCUCA   515 Target Full Sequence	1.5	PREDICTED: Glycine max cysteine synthase-like (LOC100796465), transcript variant X4, mRNA	cysteine synthase-like(LOC100796465)	coding protein	psRNATarget
XM_014779020.1	ncRNA:22   GAGACAAACCUAUUUCAAGAGU   1   =*|||||||||||||*|||||| targets:580   UCCUGUUUGGAUAAACUUCUCA   601 Target Full Sequence	1.5	PREDICTED: Glycine max cysteine synthase-like (LOC100796465), transcript variant X2, mRNA	cysteine synthase-like(LOC100796465)	coding protein	psRNATarget
XM_014779021.1	ncRNA:22   GAGACAAACCUAUUUCAAGAGU   1   =*|||||||||||||*|||||| targets:604   UCCUGUUUGGAUAAACUUCUCA   625 Target Full Sequence	1.5	PREDICTED: Glycine max cysteine synthase-like (LOC100796465), transcript variant X3, mRNA	cysteine synthase-like(LOC100796465)	coding protein	psRNATarget
XM_014779019.1	ncRNA:22   GAGACAAACCUAUUUCAAGAGU   1   =*|||||||||||||*|||||| targets:690   UCCUGUUUGGAUAAACUUCUCA   711 Target Full Sequence	1.5	PREDICTED: Glycine max cysteine synthase-like (LOC100796465), transcript variant X1, mRNA	cysteine synthase-like(LOC100796465)	coding protein	psRNATarget
BT091189.1	ncRNA:22   GAGACAAACCUAUUUCAAGAGU   1   =|*||||||||||||*|||||| targets:662   UUAUGUUUGGAUAAAUUUCUCA   683 Target Full Sequence	1.5	Soybean clone JCVI-FLGm-7I20 unknown mRNA	NA	coding protein	psRNATarget
XM_003521063.3	ncRNA:22   GAGACAAACCUAUUUCAAGAGU   1   *||||||||||||||*|||||* targets:1529   GUCUGUUUGGAUAAACUUCUCU   1550 Target Full Sequence	2.5	PREDICTED: Glycine max transcription factor PCL1-like (LOC100815363), mRNA	transcription factor PCL1-like(LOC100815363)	coding protein	psRNATarget

Reference

1	PMID:24475082 "Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014).