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BaseInfo

ncRNA ID gma-miR394b-3p
Species Glycine max
Class miRNA
Genome position chr14:48984878-48984981 [-]
Reference genome v1.0
Source miRBase
Length 20
Mature sequence(if miRNA) 12 - AGGUGGGCAUACUGUCAACU - 31
Stem-loop(if miRNA)        GU   -      U C            -    - -U  -----U   U
UAACAGA  UUA UUGGCA U UGUCCACCUCCA CUUC C  AC      CUC C
|||||||  ||| |||||| | |||||||||||| |||| |  ||      ||| U
GUUGUCU  AGU AACUGU A ACGGGUGGAGGU GAAG G  UG      GAG C
       UG   C      C U            U    U CU  UACACC   U
Stem-loop sequence UAACAGAGUUUAUUGGCAUUCUGUCCACCUCCACUUCCUACUCUCUCUCUGAGCCACAUGUUCGUGAAGUUGGAGGUGGGCAUACUGUCAACUGAGUUCUGUUG

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).
2 PMID:22156213
"MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs";
Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC;
Genes Dev. 25:2540-2553(2011).