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BaseInfo

ncRNA ID gma-miR1517
Species Glycine max
Class miRNA
Genome position chr14:44412355-44412751 [+]
Reference genome v1.0
Source miRBase
Length 24
Mature sequence(if miRNA) 364 - AGUCUUGGUCAAUGUCGUUCGAAA - 387
Stem-loop(if miRNA)       -UA       C       A   -AU                 AU     AA - UUUUACAGUCGACAUCCACUAGAGUUUUUUCGAUCGACAUCGGUCAAAGCAAUUUUUUAGCCAACAUCAAUCAAGGCUAUUUUAUAGCCGAUGUUGGGUAGGGUUUUUUAUUCGACAUCAGUCAGGGCUAUUUUUUAGCCA
GCUAGG   UUUUUGA CGACAUU GAC   GACUAUUUUUAGUCGAC  UGACU  G U                                                                                                                                             A
||||||   ||||||| ||||||| |||   |||||||||||||||||  |||||  | |
UGAUCC   AAAAGCU GCUGUAA CUG   CUGAUAAAAAUCGGUUG  AGUUG  G U                                                                                                                                             C
      CAA       U       -   GUU                 -C     -- A UUUUUAGGAUCGUCCGCAACUGUUUUUUUAGAUAGAUCAUAGCUGAUUUUUUAUCGAACCAGCUACGGCUGGUUAUCUUGGAUGGGCUACAGCUGACUUUUUGUAGUAAUCAGUUACAACCGACUUUUUAGAGAUCAGCUU
Stem-loop sequence GCUAGGUAUUUUUGACCGACAUUAGACAUGACUAUUUUUAGUCGACAUUGACUAAGUUUUUACAGUCGACAUCCACUAGAGUUUUUUCGAUCGACAUCGGUCAAAGCAAUUUUUUAGCCAACAUCAAUCAAGGCUAUUUUAUAGCCGAUGUUGGGUAGGGUUUUUUAUUCGACAUCAGUCAGGGCUAUUUUUUAGCCAACUUCGACUAGAGAUUUUUCAGCCAACAUUGACUAAUGAUGUUUUUCAGUCGACAUCGGGUAGGUUCUAUUGGUCGGCAUCGACCAAGCUAUUUUUUAGUCGAUACUAGAUAGAUUUUUUUGUCAACGCCUGCUAGGAUUUUUUAGGUUGACGUUGGCUAAAAAUAGUCUUGGUCAAUGUCGUUCGAAAAAACCCUAGU

Reference

1 PMID:18402695
"Novel and nodulation-regulated microRNAs in soybean roots";
Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O;
BMC Genomics. 9:160(2008).