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BaseInfo

ncRNA ID gma-miR9753
Species Glycine max
Class miRNA
Genome position chr14:38887525-38887753 [-]
Reference genome v1.0
Source miRBase
Length 24
Mature sequence(if miRNA) 76 - ACAAUUUGGGACUUAGGGCUACAA - 99
Stem-loop(if miRNA)                    GUC A          A    AA   -       G                C A   A     A               C         AUUUAUU
ACAUUUUGUUUUCCUUCUU   G CUUCUUAAAG CUAA  CCC CAAAACC AAGCUCCAAAAUUAGC C UCU UUGUA CCCUAAGUCCCAAAU GUGAUAUGU       A
|||||||||||||||||||   | |||||||||| ||||  ||| ||||||| |||||||||||||||| | ||| ||||| ||||||||||||||| |||||||||       A
UGUAAAACAAAAGGAGGAA   C GAAGAAUUUC GAUU  GGG GUUUUGG UUCGGGGUUUUGGUUG G AGA AACAU GGGAUUCAGGGUUUA CACUAUAUA       U
                   AAC C          G    -C   U       G                A A   C     C               A         AUCUUCA
Stem-loop sequence ACAUUUUGUUUUCCUUCUUGUCGACUUCUUAAAGACUAAAACCCCAAAACCGAAGCUCCAAAAUUAGCCCAUCUAUUGUAACCCUAAGUCCCAAAUCGUGAUAUGUAUUUAUUAAUACUUCUAAUAUAUCACAAUUUGGGACUUAGGGCUACAACAGAAGAGUUGGUUUUGGGGCUUGGGUUUUGUGGGCUUAGGCUUUAAGAAGCCCAAAAGGAGGAAAACAAAAUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014776737.1
ncRNA:22   AAGAUAAAACUGUGAUAGAGAU   1
  ||=|||*||||||||=||||||
targets:777   UUUUAUCUUGACACUGUCUCUA   798

2.5 PREDICTED: Glycine max S-locus-specific glycoprotein BS29-2-like (LOC106798962), mRNA S-locus-specific glycoprotein BS29-2-like(LOC106798962) coding protein psRNATarget

Reference

1 PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons";
Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ;
PLoS One. 9:e86153(2014).