ncRNA ID | gma-miR9753 |
Species | Glycine max |
Class | miRNA |
Genome position | chr14:38887525-38887753 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 76 - ACAAUUUGGGACUUAGGGCUACAA - 99 |
Stem-loop(if miRNA) |
                   GUC A          A    AA   -       G                C A   A     A               C         AUUUAUU ACAUUUUGUUUUCCUUCUU   G CUUCUUAAAG CUAA  CCC CAAAACC AAGCUCCAAAAUUAGC C UCU UUGUA CCCUAAGUCCCAAAU GUGAUAUGU       A |||||||||||||||||||   | |||||||||| ||||  ||| ||||||| |||||||||||||||| | ||| ||||| ||||||||||||||| |||||||||       A UGUAAAACAAAAGGAGGAA   C GAAGAAUUUC GAUU  GGG GUUUUGG UUCGGGGUUUUGGUUG G AGA AACAU GGGAUUCAGGGUUUA CACUAUAUA       U                    AAC C          G    -C   U       G                A A   C     C               A         AUCUUCA |
Stem-loop sequence | ACAUUUUGUUUUCCUUCUUGUCGACUUCUUAAAGACUAAAACCCCAAAACCGAAGCUCCAAAAUUAGCCCAUCUAUUGUAACCCUAAGUCCCAAAUCGUGAUAUGUAUUUAUUAAUACUUCUAAUAUAUCACAAUUUGGGACUUAGGGCUACAACAGAAGAGUUGGUUUUGGGGCUUGGGUUUUGUGGGCUUAGGCUUUAAGAAGCCCAAAAGGAGGAAAACAAAAUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014776737.1 |
|
2.5 | PREDICTED: Glycine max S-locus-specific glycoprotein BS29-2-like (LOC106798962), mRNA | S-locus-specific glycoprotein BS29-2-like(LOC106798962) | coding protein | psRNATarget |
1 | PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014). |