ncRNA ID | gma-miR5780c |
Species | Glycine max |
Class | miRNA |
Genome position | chr14:33572228-33572414 [-] |
Reference genome | v1.0 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 6 - UUUAAUAUAUCAGGGACUUGGA - 27 |
Stem-loop(if miRNA) |
U       UG       A                    U   CC   ACCGCCA   A       ACA  A      UC    GA  GAUAUA  GUUGUUC  AGUCUCU AUAUAUUAAAAGUUUUGUUU GGG  CCU       AUU AGUGAUG   UG CAUCAU  CAAU  CU      U  |||||||  ||||||| |||||||||||||||||||| |||  |||       ||| |||||||   || ||||||  ||||  ||      A  UAACAAG  UCAGGGA UAUAUAAUUUUCAAAACAAA CCC  GGA       UAA UCACUAC   AC GUGGUA  GUUG  GA      U -       GU       C                    -   UA   ACAGUAG   A       CAC  C      GA    UC  GAAGGU |
Stem-loop sequence | UGUUGUUCUGAGUCUCUAAUAUAUUAAAAGUUUUGUUUUGGGCCCCUACCGCCAAUUAAGUGAUGACAUGACAUCAUUCCAAUGACUGAUAUAUAUUGGAAGAGCUGUUGAGAUGGUGCCACACCAUCACUAAAUGAUGACAAGGAUCCCAAACAAAACUUUUAAUAUAUCAGGGACUUGGAACAAU |
1 | PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014). |