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BaseInfo

ncRNA ID gma-miR5780c
Species Glycine max
Class miRNA
Genome position chr14:33572228-33572414 [-]
Reference genome v1.0
Source miRBase
Length 22
Mature sequence(if miRNA) 6 - UUUAAUAUAUCAGGGACUUGGA - 27
Stem-loop(if miRNA) U       UG       A                    U   CC   ACCGCCA   A       ACA  A      UC    GA  GAUAUA
 GUUGUUC  AGUCUCU AUAUAUUAAAAGUUUUGUUU GGG  CCU       AUU AGUGAUG   UG CAUCAU  CAAU  CU      U
 |||||||  ||||||| |||||||||||||||||||| |||  |||       ||| |||||||   || ||||||  ||||  ||      A
 UAACAAG  UCAGGGA UAUAUAAUUUUCAAAACAAA CCC  GGA       UAA UCACUAC   AC GUGGUA  GUUG  GA      U
-       GU       C                    -   UA   ACAGUAG   A       CAC  C      GA    UC  GAAGGU
Stem-loop sequence UGUUGUUCUGAGUCUCUAAUAUAUUAAAAGUUUUGUUUUGGGCCCCUACCGCCAAUUAAGUGAUGACAUGACAUCAUUCCAAUGACUGAUAUAUAUUGGAAGAGCUGUUGAGAUGGUGCCACACCAUCACUAAAUGAUGACAAGGAUCCCAAACAAAACUUUUAAUAUAUCAGGGACUUGGAACAAU

Reference

1 PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons";
Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ;
PLoS One. 9:e86153(2014).