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BaseInfo

ncRNA ID gma-miR4401a
Species Glycine max
Class miRNA
Genome position chr14:24664928-24665043 [+]
Reference genome v1.0
Source miRBase
Length 24
Mature sequence(if miRNA) 85 - ACAACGUCUUUGAAAGUAGGCAUU - 108
Stem-loop(if miRNA)       U                    A                      U   A U
CGUCUU GAAUGCCUACUUUCAAAGAC UUGUUGAGGUAAGCACCGUCUU GAA G A
|||||| |||||||||||||||||||| |||||||||||||||||||||| ||| |
GCAGAA CUUACGGAUGAAAGUUUCUG AACAACUCCAUUCGUGGUAGAA CUU C C
      U                    C                      U   A G
Stem-loop sequence CGUCUUUGAAUGCCUACUUUCAAAGACAUUGUUGAGGUAAGCACCGUCUUUGAAAGUACGCAUUCUAAGAUGGUGCUUACCUCAACAACGUCUUUGAAAGUAGGCAUUCUAAGACG

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).
2 PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons";
Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ;
PLoS One. 9:e86153(2014).