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BaseInfo

ncRNA ID	gma-miR4352b
Species	Glycine max
Class	miRNA
Genome position	chr14:14128764-14128933 [+]
Reference genome	v1.0
Source	miRBase
Length	24
Mature sequence(if miRNA)	133 - UAAAAUGUAGACAUUCUAAGACGG - 156
Stem-loop(if miRNA)	C                        A C          C  CA     CU    A     -----         UUUA GAUUUUUU AGAAACCGUCUUAGAAUGUUUACA U UAAGACGAUU UU  AAGAA  GUCU AGAGU     GUUUGUUUU    A |||||||| |||||||||||||||||||||||| | |||||||||| ||  |||||  |||| |||||     |||||||||    A CUAAAAAA UUUUUGGCAGAAUCUUACAGAUGU A AUUUUGCUAA AA  UUUUU  UAGA UCUUA     UAAAUAAAA    A         C                        A A          A  CC     AG    A     AGAUU         UUAA
Stem-loop sequence	GAUUUUUUCAGAAACCGUCUUAGAAUGUUUACAAUCUAAGACGAUUCUUCAAAGAACUGUCUAAGAGUGUUUGUUUUUUUAAAAAAUUAAAAUAAAUUUAGAAUUCUAAGAUGAUUUUUCCAAAAAUCGUUUUAAAAUGUAGACAUUCUAAGACGGUUUUUCAAAAAAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014763138.1	ncRNA:24   GGCAGAAUCUUACAGAUGUAAAAU   1   |||||||||||||||||=|||||| targets:1437   CCGUCUUAGAAUGUCUAUAUUUUA   1460 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X3, mRNA	uncharacterized LOC100806242(LOC100806242)	coding protein	psRNATarget
XM_006589010.2	ncRNA:24   GGCAGAAUCUUACAGAUGUAAAAU   1   |||||||||||||||||=|||||| targets:2146   CCGUCUUAGAAUGUCUAUAUUUUA   2169 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X2, mRNA	uncharacterized LOC100806242(LOC100806242)	coding protein	psRNATarget

Reference

1	PMID:20122185 "Prediction of novel miRNAs and associated target genes in Glycine max"; Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G; BMC Bioinformatics. 11 Suppl 1:S14(2010).