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BaseInfo

ncRNA ID	gma-miR396h
Species	Glycine max
Class	miRNA
Genome position	chr14:13971419-13971566 [+]
Reference genome	v1.0
Source	miRBase
Length	20
Mature sequence(if miRNA)	22 - UCCACAGCUUUCUUGAACUG - 41
Stem-loop(if miRNA)	--    U    C     C          U      AC   GUUGUGUGAGGUUUCUCCAAGUGAAGGUUU GAAU  GGUC UUUU GUGAU UUCCACAGCU UCUUGA  UGU                              A ||||  |||| |||| ||||| |||||||||| ||||||  |||                              A CUUG  CUAG AGAG CACUA AAGGUGUCGA AGAACU  AAC                              G     CU    U    U     A          U      -U   ACGAGUUUCUUAAAUACAACGUAUUCCCUA
Stem-loop sequence	GAAUGGUCUUUUUCGUGAUCUUCCACAGCUUUCUUGAACUGUGUUGUGUGAGGUUUCUCCAAGUGAAGGUUUAAGAUCCCUUAUGCAACAUAAAUUCUUUGAGCACAAUUCAAGAUAGCUGUGGAAAAUCACUGAGAUGAUCUCGUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003551282.3	ncRNA:20   GUCAAGUUCUUUCGACACCU   1   =|*|||*||||||||||||| targets:384   UAUUUCCAGAAAGCUGUGGA   403 Target Full Sequence	2.0	PREDICTED: Glycine max mitochondrial import receptor subunit TOM20-like (LOC100775949), transcript variant X1, mRNA	mitochondrial import receptor subunit TOM20-like(LOC100775949)	coding protein	psRNATarget
XM_006601834.2	ncRNA:20   GUCAAGUUCUUUCGACACCU   1   =|*|||*||||||||||||| targets:388   UAUUUCCAGAAAGCUGUGGA   407 Target Full Sequence	2.0	PREDICTED: Glycine max mitochondrial import receptor subunit TOM20-like (LOC100775949), transcript variant X2, mRNA	mitochondrial import receptor subunit TOM20-like(LOC100775949)	coding protein	psRNATarget
HI410588.1	ncRNA:20   GUCAAGUUCUUUCGACACCU   1   ||*|||||||*||||||||| targets:92   CAAUUCAAGAUAGCUGUGGA   111 Target Full Sequence	2.5	Sequence 8713 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242718.1	ncRNA:20   GUCAAGUUCUUUCGACACCU   1   ||*|||||||*||||||||| targets:92   CAAUUCAAGAUAGCUGUGGA   111 Target Full Sequence	2.5	Sequence 8713 from Patent EP2985353	NA	coding protein	psRNATarget
JB171049.1	ncRNA:20   GUCAAGUUCUUUCGACACCU   1   ||*|||||||*||||||||| targets:92   CAAUUCAAGAUAGCUGUGGA   111 Target Full Sequence	2.5	Sequence 8713 from Patent EP2559767	NA	coding protein	psRNATarget

Reference

1	PMID:21663675 "Identification of novel soybean microRNAs involved in abiotic and biotic stresses"; Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R; BMC Genomics. 12:307(2011).
2	PMID:24475082 "Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014).