| ncRNA ID | gma-miR5678 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | chr14:6757382-6757623 [+] |
| Reference genome | v1.0 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 11 - UUCCAUGAUAAGAUCUUUGAC - 31 |
| Stem-loop(if miRNA) |
GC C CACAUG A U G G C A C U CUACACA UAAGCAUAUCAC AGGACA GUUCCAUGAUAAGAUCUUUGACUG GUUCUA AAUU C GUUGGUAAUAA AGUGAUGACAU GUA UU UUU UUGGAUGAGGUGA UGA C |||||| |||||||||||||||||||||||| |||||| |||| | ||||||||||| ||||||||||| ||| || ||| ||||||||||||| ||| UCCUGU CAAGGUACUAUUCUAGAAACUGAC UAAGAU UUAA G CAACUAUUAUU UCACUACUGUA CAU AA AAG AACCUACUCCACU UCU A CA A ------ C C A A A A A U CACGACC CUUUAAGACAUA |
| Stem-loop sequence | GCAGGACACGUUCCAUGAUAAGAUCUUUGACUGCACAUGGUUCUAAAAUUUCGGUUGGUAAUAAGAGUGAUGACAUCGUAAUUCUUUUUUGGAUGAGGUGACUACACAUGAUAAGCAUAUCACCAAUACAGAAUUUCUCUCCAGCACUCACCUCAUCCAAUGAAAAAAUACAAUGUCAUCACUAUUAUUAUCAACAGCAAUUCUAGAAUCAGUCAAAGAUCUUAUCAUGGAACAUGUCCUAC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_006595890.2 |
|
0.0 | PREDICTED: Glycine max protein OSB1, mitochondrial-like (LOC100818465), transcript variant X5, mRNA | protein OSB1, mitochondrial-like(LOC100818465) | coding protein | psRNATarget | |||||||||
| XM_006595889.2 |
|
0.0 | PREDICTED: Glycine max protein OSB1, mitochondrial-like (LOC100818465), transcript variant X4, mRNA | protein OSB1, mitochondrial-like(LOC100818465) | coding protein | psRNATarget |
| 1 | PMID:21219599
"Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing"; Song QX, Liu YF, Hu XY, Zhang WK, Ma B, Chen SY, Zhang JS; BMC Plant Biol. 11:5(2011). |
| 2 | PMID:24475082
"Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014). |