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BaseInfo

ncRNA ID	gma-miR4348b
Species	Glycine max
Class	miRNA
Genome position	chr13:37642614-37642836 [+]
Reference genome	v1.0
Source	miRBase
Length	21
Mature sequence(if miRNA)	197 - UCUUUUGAAUUUGACUAUUAG - 217
Stem-loop(if miRNA)	G           C          U           A  C                   UAU GUAGUGGUUAUAGAUAUAAAAGUGACUUUCUACAUGUUUAAAGC UAGAAA UAAUAGUCAAA UCAAAAGAUA UGAAAGAUUAU UG UAGACUUGUAGGAUGGUGA   U                                            U |||||| ||||||||||| |||||||||| ||||||||||| || |||||||||||||||||||   | AUCUUU AUUAUCAGUUU AGUUUUCUAU AUUUUCUAAUA AC GUUUGAACAUUUUACUGGU   G                                            A       G           A          U           C  A                   --- UGUAAUACCACUAACACUUACAUCCAAUGAAAAAUGUAACCAAU
Stem-loop sequence	UAGAAAGUAAUAGUCAAACUCAAAAGAUAUUGAAAGAUUAUAUGCUAGACUUGUAGGAUGGUGAUAUUGUAGUGGUUAUAGAUAUAAAAGUGACUUUCUACAUGUUUAAAGCUAUAACCAAUGUAAAAAGUAACCUACAUUCACAAUCACCAUAAUGUGUGGUCAUUUUACAAGUUUGACACAUAAUCUUUUAUUAUCUUUUGAAUUUGACUAUUAGUUUCUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003517760.3	ncRNA:21   GAUUAUCAGUUUAAGUUUUCU   1   ||||||||||||||||||||| targets:857   CUAAUAGUCAAAUUCAAAAGA   877 Target Full Sequence	0.0	PREDICTED: Glycine max transcription repressor MYB5-like (LOC100787150), mRNA	transcription repressor MYB5-like(LOC100787150)	coding protein	psRNATarget
XM_003552395.2	ncRNA:21   GAUUAUCAGUUUAAGUUUUCU   1   |*||||*||||||||||=||| targets:158   CCAAUAAUCAAAUUCAAGAGA   178 Target Full Sequence	2.5	PREDICTED: Glycine max probable tyrosine-protein phosphatase At1g05000 (LOC100787713), mRNA	probable tyrosine-protein phosphatase At1g05000(LOC100787713)	coding protein	psRNATarget
XM_014766454.1	ncRNA:21   GAUUAUCAGUUUAAGUUUUCU   1   =*|=|||*||||||||||||= targets:866   UCAGUAGCCAAAUUCAAAAGG   886 Target Full Sequence	3.0	PREDICTED: Glycine max myb-related protein 308-like (LOC100790887), mRNA	myb-related protein 308-like(LOC100790887)	coding protein	psRNATarget
XM_014768409.1	ncRNA:21   GAUUAUCAGUUUAAGUUUUCU   1   **||*=||||||||||||||= targets:610   AAAAGGGUCAAAUUCAAAAGG   630 Target Full Sequence	3.0	PREDICTED: Glycine max E3 ubiquitin-protein ligase PUB24-like (LOC100798446), mRNA	E3 ubiquitin-protein ligase PUB24-like(LOC100798446)	coding protein	psRNATarget

Reference

1	PMID:24475082 "Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014).