Search result

BaseInfo

ncRNA ID gma-miR4389
Species Glycine max
Class miRNA
Genome position chr13:31669956-31670102 [-]
Reference genome v1.0
Source miRBase
Length 24
Mature sequence(if miRNA) 121 - UCGGUCGGACCGAUCCAAUCGGAA - 144
Stem-loop(if miRNA)       -         A      C     -    UGGCCUAACCAGAUCGGUUUUACUAUUGGAUUGAUCAUG
CGGUCG GUCGGACCG UCCAAU GGAAU CUAG                                       C
|||||| ||||||||| |||||| ||||| ||||                                       A
GCCGGC CAGCCUGGC AGGUUG CCUUA GCUA                                       A
      U         C      A     A    UGUAUUAGCCGGCUCAAACUAGUCCAGUAAGUUCCAAUU
Stem-loop sequence CGGUCGGUCGGACCGAUCCAAUCGGAAUCUAGUGGCCUAACCAGAUCGGUUUUACUAUUGGAUUGAUCAUGCAAUUAACCUUGAAUGACCUGAUCAAACUCGGCCGAUUAUGUAUCGAAUUCCAGUUGGACCGGUCCGACUCGGCCG

Reference

1 PMID:20122185
"Prediction of novel miRNAs and associated target genes in Glycine max";
Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G;
BMC Bioinformatics. 11 Suppl 1:S14(2010).