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BaseInfo

ncRNA ID	gma-miR171o-5p
Species	Glycine max
Class	miRNA
Genome position	chr13:30650791-30650892 [+]
Reference genome	v1.0
Source	miRBase
Length	21
Mature sequence(if miRNA)	11 - AGAUAUUGGUACGGUUCAAUC - 31
Stem-loop(if miRNA)	U   --G  U  A                       A  C  U      UG  AAG   GC UG GAUAUUGGUACGGUUCAAUCAGA GA AG GCUUUA  A  |||   || || ||||||||||||||||||||||| || || ||||||  UUC   CG AC CUAUAACCGUGCCGAGUUAGUUU UU UC CGAAAU  U U   AAA  U  A                       A  C  U      CU
Stem-loop sequence	UAAGGGCUUGAGAUAUUGGUACGGUUCAAUCAGAAGACAGUGCUUUAUGAUUCUAAAGCUCUCUUAUUUGAUUGAGCCGUGCCAAUAUCACAUGCAAACUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB170970.1	ncRNA:21   CUAACUUGGCAUGGUUAUAGA   1   ||||||=||||=||||||||| targets:76   GAUUGAGCCGUGCCAAUAUCU   96 Target Full Sequence	2.5	Sequence 8634 from Patent EP2559767	NA	coding protein	psRNATarget
HI410509.1	ncRNA:21   CUAACUUGGCAUGGUUAUAGA   1   ||||||=||||=||||||||| targets:76   GAUUGAGCCGUGCCAAUAUCU   96 Target Full Sequence	2.5	Sequence 8634 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242639.1	ncRNA:21   CUAACUUGGCAUGGUUAUAGA   1   ||||||=||||=||||||||| targets:76   GAUUGAGCCGUGCCAAUAUCU   96 Target Full Sequence	2.5	Sequence 8634 from Patent EP2985353	NA	coding protein	psRNATarget

Reference

1	PMID:22156213 "MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs"; Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC; Genes Dev. 25:2540-2553(2011).
2	PMID:24475082 "Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014).