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BaseInfo

ncRNA ID	gma-miR9725
Species	Glycine max
Class	miRNA
Genome position	chr13:22172678-22172836 [-]
Reference genome	v1.0
Source	miRBase
Length	21
Mature sequence(if miRNA)	121 - UUAAUUUUUUUGGAUCAGCAU - 141
Stem-loop(if miRNA)	A CUU                CAUC  GA  U               UC  A   GUGUUUUGU GUCAAAUAGUCUAUU C   AAUUUUUUUGGAUCAG    UG  UC AAAUUAAGACCUAAA  AU CAU         C ||||||||||||||| |   ||||||||||||||||    ||  || |||||||||||||||  || |||         U UAGUUUAUCGGAUAA G   UUAAAGAAACCUAGUU    AC  AG UUUAGUUCUGGGUUU  UA GUA         A                C CAU                -AAA  UC  U               UU  -   AUUUUUUUU
Stem-loop sequence	GUCAAAUAGUCUAUUACCUUAAUUUUUUUGGAUCAGCAUCUGGAUCUAAAUUAAGACCUAAAUCAUACAUGUGUUUUGUCUAUUUUUUUUAAUGAUUUUUUGGGUCUUGAUUUUGACUCAAAAUUGAUCCAAAGAAAUUUACGCAAUAGGCUAUUUGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT095930.1	ncRNA:21   UACGACUAGGUUUUUUUAAUU   1   ||||||*|||||||||*|||| targets:1140   AUGCUGCUCCAAAAAACUUAA   1160 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-15E6 unknown mRNA	NA	coding protein	psRNATarget
BT093566.1	ncRNA:21   UACGACUAGGUUUUUUUAAUU   1   ||*||||||||||||||||*| targets:1210   AUUCUGAUCCAAAAAAAUUUA   1230 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-24A2 unknown mRNA	NA	coding protein	psRNATarget
AK286794.1	ncRNA:21   UACGACUAGGUUUUUUUAAUU   1   ||*||||||||||||||||*| targets:1270   AUUCUGAUCCAAAAAAAUUUA   1290 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-36-N08	NA	coding protein	psRNATarget
XM_006589517.2	ncRNA:21   UACGACUAGGUUUUUUUAAUU   1   ||*||||||||||||||||*| targets:1285   AUUCUGAUCCAAAAAAAUUUA   1305 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100813031 (LOC100813031), transcript variant X3, mRNA	uncharacterized LOC100813031(LOC100813031)	coding protein	psRNATarget
XM_003536464.3	ncRNA:21   UACGACUAGGUUUUUUUAAUU   1   ||*||||||||||||||||*| targets:1310   AUUCUGAUCCAAAAAAAUUUA   1330 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100813031 (LOC100813031), transcript variant X2, mRNA	uncharacterized LOC100813031(LOC100813031)	coding protein	psRNATarget
XM_014763360.1	ncRNA:21   UACGACUAGGUUUUUUUAAUU   1   ||*||||||||||||||||*| targets:1316   AUUCUGAUCCAAAAAAAUUUA   1336 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100813031 (LOC100813031), transcript variant X1, mRNA	uncharacterized LOC100813031(LOC100813031)	coding protein	psRNATarget
XM_003536463.3	ncRNA:21   UACGACUAGGUUUUUUUAAUU   1   ||*||||||||||||||||*| targets:1278   AUUCUGAUCCAAAAAAAUUUA   1298 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100813031 (LOC100813031), transcript variant X4, mRNA	uncharacterized LOC100813031(LOC100813031)	coding protein	psRNATarget
XM_006584049.2	ncRNA:21   UACGACUAGGUUUUUUUAAUU   1   ||||||*|||||||||*|||| targets:1301   AUGCUGCUCCAAAAAACUUAA   1321 Target Full Sequence	2.5	PREDICTED: Glycine max calcineurin B-like protein 3 (LOC100800868), transcript variant X2, mRNA	calcineurin B-like protein 3(LOC100800868)	coding protein	psRNATarget
XM_003529635.3	ncRNA:21   UACGACUAGGUUUUUUUAAUU   1   ||||||*|||||||||*|||| targets:1338   AUGCUGCUCCAAAAAACUUAA   1358 Target Full Sequence	2.5	PREDICTED: Glycine max calcineurin B-like protein 3 (LOC100800868), transcript variant X1, mRNA	calcineurin B-like protein 3(LOC100800868)	coding protein	psRNATarget

Reference

1	PMID:24475082 "Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons"; Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ; PLoS One. 9:e86153(2014).